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F5H1Z7 (F5H1Z7_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length769 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains Sema domain. SAAS SAAS016201

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000445649

Ontologies

Keywords
   PTMDisulfide bond SAAS SAAS016201
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processmulticellular organismal development

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionreceptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5H1Z7 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 765BB9E5AA5E4044

FASTA76987,285
        10         20         30         40         50         60 
MLSKKGIFPW ILTCISEEMA FRTICVLVGV FICSICVKGS SQPQARVYLT FDELRETKTS 

        70         80         90        100        110        120 
EYFSLSHHPL DYRILLMDED QDRIYVGSKD HILSLNINNI SQEALSVFWP ASTIKVEECK 

       130        140        150        160        170        180 
MAGKDPTHGC GNFVRVIQTF NRTHLYVCGS GAFSPVCTYL NRGRRSEDQV FMIDSKCESG 

       190        200        210        220        230        240 
KGRCSFNPNV NTVSVMINEE LFSGMYIDFM GTDAAIFRSL TKRNAVRTDQ HNSKWLSEPM 

       250        260        270        280        290        300 
FVDAHVIPDG TDPNDAKVYF FFKEKLTDNN RSTKQIHSMI ARICPNDTGG LRSLVNKWTT 

       310        320        330        340        350        360 
FLKARLVCSV TDEDGPETHF DELEDVFLLE TDNPRTTLVY GIFTTSSSVF KGSAVCVYHL 

       370        380        390        400        410        420 
SDIQTVFNGP FAHKEGPNHQ LISYQGRIPY PRPGTCPGGA FTPNMRTTKE FPDDVVTFIR 

       430        440        450        460        470        480 
NHPLMYNSIY PIHKRPLIVR IGTDYKYTKI AVDRVNAADG RYHVLFLGTD RGTVQKVVVL 

       490        500        510        520        530        540 
PTNNSVSGEL ILEELEVFKN HAPITTMKIS SKKQQLYVSS NEGVSQVSLH RCHIYGTACA 

       550        560        570        580        590        600 
DCCLARDPYC AWDGHSCSRF YPTGKRRSRR QDVRHGNPLT QCRGFNLKAY RNAAEIVQYG 

       610        620        630        640        650        660 
VKNNTTFLEC APKSPQASIK WLLQKDKDRR KEVKLNERII ATSQGLLIRS VQGSDQGLYH 

       670        680        690        700        710        720 
CIATENSFKQ TIAKINFKVL DSEMVAVVTD KWSPWTWASS VRALPFHPKD IMGAFSHSEM 

       730        740        750        760 
QMINQYCKDT RQQHQQGDES QKMRGDYGKL KALINSRKSR NRRNQLPES 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence of human chromosome 7."
Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. expand/collapse author list , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC004880 Genomic DNA. No translation available.
AC004972 Genomic DNA. No translation available.
AC073850 Genomic DNA. No translation available.
AC093683 Genomic DNA. No translation available.
UniGeneHs.269109.

3D structure databases

ProteinModelPortalF5H1Z7.
SMRF5H1Z7. Positions 46-675.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEF5H1Z7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000544525; ENSP00000445649; ENSG00000075223.
KEGGhsa:10512.
UCSCuc011kgw.2. human.

Organism-specific databases

CTD10512.
HGNCHGNC:10725. SEMA3C.
GenAtlasSearch...

Phylogenomic databases

KOK06840.
OMAAEIVQYG.

Gene expression databases

ArrayExpressF5H1Z7.
BgeeF5H1Z7.

Family and domain databases

Gene3D2.130.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR016201. Plexin-like_fold.
IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERPTHR11036. PTHR11036. 1 hit.
PfamPF07679. I-set. 1 hit.
PF01403. Sema. 1 hit.
[Graphical view]
SMARTSM00409. IG. 1 hit.
SM00423. PSI. 1 hit.
SM00630. Sema. 1 hit.
[Graphical view]
SUPFAMSSF101912. SSF101912. 1 hit.
SSF103575. SSF103575. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS51004. SEMA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSSEMA3C. human.
GenomeRNAi10512.
NextBio35508311.

Entry information

Entry nameF5H1Z7_HUMAN
AccessionPrimary (citable) accession number: F5H1Z7
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.