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F5H1Z7

- F5H1Z7_HUMAN

UniProt

F5H1Z7 - F5H1Z7_HUMAN

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Protein
Submitted name:

Semaphorin-3C

Gene
SEMA3C
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. receptor activity Source: InterPro

GO - Biological processi

  1. multicellular organismal development Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Semaphorin-3CImported
Gene namesi
Name:SEMA3CImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 7

Organism-specific databases

HGNCiHGNC:10725. SEMA3C.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotations

Proteomic databases

PRIDEiF5H1Z7.

Expressioni

Gene expression databases

ArrayExpressiF5H1Z7.
BgeeiF5H1Z7.

Structurei

3D structure databases

ProteinModelPortaliF5H1Z7.
SMRiF5H1Z7. Positions 46-675.

Family & Domainsi

Sequence similaritiesi

Contains Sema domain.SAAS annotations

Phylogenomic databases

OMAiAEIVQYG.
PhylomeDBiF5H1Z7.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR016201. Plexin-like_fold.
IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PANTHERiPTHR11036. PTHR11036. 1 hit.
PfamiPF07679. I-set. 1 hit.
PF01403. Sema. 1 hit.
[Graphical view]
SMARTiSM00409. IG. 1 hit.
SM00423. PSI. 1 hit.
SM00630. Sema. 1 hit.
[Graphical view]
SUPFAMiSSF101912. SSF101912. 1 hit.
SSF103575. SSF103575. 1 hit.
PROSITEiPS50835. IG_LIKE. 1 hit.
PS51004. SEMA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5H1Z7-1 [UniParc]FASTAAdd to Basket

« Hide

MLSKKGIFPW ILTCISEEMA FRTICVLVGV FICSICVKGS SQPQARVYLT    50
FDELRETKTS EYFSLSHHPL DYRILLMDED QDRIYVGSKD HILSLNINNI 100
SQEALSVFWP ASTIKVEECK MAGKDPTHGC GNFVRVIQTF NRTHLYVCGS 150
GAFSPVCTYL NRGRRSEDQV FMIDSKCESG KGRCSFNPNV NTVSVMINEE 200
LFSGMYIDFM GTDAAIFRSL TKRNAVRTDQ HNSKWLSEPM FVDAHVIPDG 250
TDPNDAKVYF FFKEKLTDNN RSTKQIHSMI ARICPNDTGG LRSLVNKWTT 300
FLKARLVCSV TDEDGPETHF DELEDVFLLE TDNPRTTLVY GIFTTSSSVF 350
KGSAVCVYHL SDIQTVFNGP FAHKEGPNHQ LISYQGRIPY PRPGTCPGGA 400
FTPNMRTTKE FPDDVVTFIR NHPLMYNSIY PIHKRPLIVR IGTDYKYTKI 450
AVDRVNAADG RYHVLFLGTD RGTVQKVVVL PTNNSVSGEL ILEELEVFKN 500
HAPITTMKIS SKKQQLYVSS NEGVSQVSLH RCHIYGTACA DCCLARDPYC 550
AWDGHSCSRF YPTGKRRSRR QDVRHGNPLT QCRGFNLKAY RNAAEIVQYG 600
VKNNTTFLEC APKSPQASIK WLLQKDKDRR KEVKLNERII ATSQGLLIRS 650
VQGSDQGLYH CIATENSFKQ TIAKINFKVL DSEMVAVVTD KWSPWTWASS 700
VRALPFHPKD IMGAFSHSEM QMINQYCKDT RQQHQQGDES QKMRGDYGKL 750
KALINSRKSR NRRNQLPES 769
Length:769
Mass (Da):87,285
Last modified:June 28, 2011 - v1
Checksum:i765BB9E5AA5E4044
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC004880 Genomic DNA. No translation available.
AC004972 Genomic DNA. No translation available.
AC073850 Genomic DNA. No translation available.
AC093683 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000544525; ENSP00000445649; ENSG00000075223.
UCSCiuc011kgw.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC004880 Genomic DNA. No translation available.
AC004972 Genomic DNA. No translation available.
AC073850 Genomic DNA. No translation available.
AC093683 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali F5H1Z7.
SMRi F5H1Z7. Positions 46-675.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi F5H1Z7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000544525 ; ENSP00000445649 ; ENSG00000075223 .
UCSCi uc011kgw.2. human.

Organism-specific databases

HGNCi HGNC:10725. SEMA3C.
GenAtlasi Search...

Phylogenomic databases

OMAi AEIVQYG.
PhylomeDBi F5H1Z7.

Miscellaneous databases

ChiTaRSi SEMA3C. human.
GenomeRNAii 10512.
NextBioi 35508311.

Gene expression databases

ArrayExpressi F5H1Z7.
Bgeei F5H1Z7.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
2.60.40.10. 1 hit.
InterProi IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR016201. Plexin-like_fold.
IPR001627. Semap_dom.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view ]
PANTHERi PTHR11036. PTHR11036. 1 hit.
Pfami PF07679. I-set. 1 hit.
PF01403. Sema. 1 hit.
[Graphical view ]
SMARTi SM00409. IG. 1 hit.
SM00423. PSI. 1 hit.
SM00630. Sema. 1 hit.
[Graphical view ]
SUPFAMi SSF101912. SSF101912. 1 hit.
SSF103575. SSF103575. 1 hit.
PROSITEi PS50835. IG_LIKE. 1 hit.
PS51004. SEMA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence of human chromosome 7."
    Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
    , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
    Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF5H1Z7_HUMAN
AccessioniPrimary (citable) accession number: F5H1Z7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: September 3, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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