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F5H0A9 (F5H0A9_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length414 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000438117 Ensembl ENSP00000467286

Sequences

Sequence LengthMass (Da)Tools
F5H0A9 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: DD6F6C7F3C63854E

FASTA41448,349
        10         20         30         40         50         60 
MPCCSHRSCR EDPGTSESRE MDPVACEDVA VNFTQEEWAL LDISQRKLYR EVMLETFRNL 

        70         80         90        100        110        120 
TSIGKKWKDQ NIEYEYQNPR RNFRSLIEGN VNEIKEDSHC GETFTQVPDD RLNFQEKKAS 

       130        140        150        160        170        180 
PEAKSCDNFV CGEVGIGNSS FNMNIRGDIG HKAYEYQDYA PKPYKCQQPK KAFRYHPSFR 

       190        200        210        220        230        240 
TQERNHTGEK PYACKECGKT FISHSGIRRR MVMHSGDGPY KCKFCGKAVH CLRLYLIHER 

       250        260        270        280        290        300 
THTGEKPYEC KQCVKSFSYS ATHRIHERTH TGEKPYECQQ CGKAFHSSSS FQAHKRTHTG 

       310        320        330        340        350        360 
GKPYECKQCG KSFSWCHSFQ IHERTHTGEK PCECSKCNKA FRSYRSYLRH KRSHTGEKPY 

       370        380        390        400        410 
QCKECRKAFT YPSSLRRHER THSAKKPYEC KQCGKALSYK FSNTPKNALW RKTL 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and biology of human chromosome 19."
Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. expand/collapse author list , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
[3]Ensembl
Submitted (JAN-2013) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC008770 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalF5H0A9.
SMRF5H0A9. Positions 24-73, 125-411.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000538752; ENSP00000438117; ENSG00000197054.
ENST00000590798; ENSP00000467286; ENSG00000267179.
UCSCuc010xmf.3. human.

Organism-specific databases

HGNCHGNC:27614. ZNF763.
GenAtlasSearch...

Phylogenomic databases

OMAFSWCHSF.
PhylomeDBF5H0A9.
TreeFamTF338854.

Family and domain databases

Gene3D3.30.160.60. 9 hits.
InterProIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamPF01352. KRAB. 1 hit.
[Graphical view]
SMARTSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 7 hits.
[Graphical view]
SUPFAMSSF109640. SSF109640. 1 hit.
PROSITEPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 6 hits.
PS50157. ZINC_FINGER_C2H2_2. 8 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio35507986.

Entry information

Entry nameF5H0A9_HUMAN
AccessionPrimary (citable) accession number: F5H0A9
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 9, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.