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F5H008

- F5H008_HUMAN

UniProt

F5H008 - F5H008_HUMAN

Protein
Submitted name:

Vacuolar protein sorting-associated protein 33B

Gene

VPS33B

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. vesicle docking involved in exocytosis Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Vacuolar protein sorting-associated protein 33BImported
    Gene namesi
    Name:VPS33BImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 15

    Organism-specific databases

    HGNCiHGNC:12712. VPS33B.

    Expressioni

    Gene expression databases

    ArrayExpressiF5H008.
    BgeeiF5H008.

    Structurei

    3D structure databases

    ProteinModelPortaliF5H008.
    SMRiF5H008. Positions 28-587.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di3.40.50.1910. 2 hits.
    InterProiIPR027482. Sec-1-like_dom2.
    IPR001619. Sec1-like.
    IPR027121. VPS33.
    [Graphical view]
    PANTHERiPTHR11679. PTHR11679. 1 hit.
    PTHR11679:SF1. PTHR11679:SF1. 1 hit.
    PfamiPF00995. Sec1. 1 hit.
    [Graphical view]
    SUPFAMiSSF56815. SSF56815. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F5H008-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAFPHRPDAP ELPDFSMLKR LARDQLIYLL EQQHEVDKLY KVENKPALSS    50
    NEQLCFLVRP RIKNMRYIAS LVNADKLAGR TRKYKVIFSP QKFYACEMVL 100
    EEEGIYGDVS CDEWAFSLLP LDVDLLSMEL PEFFRDYFLE GDQRWINTVA 150
    QALHLLSTLY GPFPNCYGIG RCAKMAYELW RNLEEEEDGE TKGRRPEIGH 200
    IFLLDRDVDF VTALCSQVVY EGLVDDTFRI KCGSVDFGPE VTSSDKSLKV 250
    LLNAEDKVFN EIRNEHFSNV FGFLSQKARN LQAQYDRRRG MDIKQMKNFV 300
    SQELKGLKQE HRLLSLHIGA CESIMKKKTK QDFQELIKTE HALLEGFNIR 350
    ESTSYIEEHI DRQVSPIESL RLMCLLSITE NGLIPKDYRS LKTQYLQSYG 400
    PEHLLTFSNL RRAGLLTEQA PGDTLTAVES KVSKLVTDKA AGKITDAFSS 450
    LAKRSNFRAI SKKLNLIPRV DGEYDLKVPR DMAYVFGGAY VPLSCRIIEQ 500
    VLERRSWQGL DEVVRLLNCS DFAFTDMTKE DKASSESLRL ILVVFLGGCT 550
    FSEISALRFL GREKGYRFIF LTTAVTNSAR LMEAMSEVKA 590
    Length:590
    Mass (Da):67,606
    Last modified:June 28, 2011 - v1
    Checksum:i929FDF9128B3FD5C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC068831 Genomic DNA. No translation available.
    RefSeqiNP_001276077.1. NM_001289148.1.
    UniGeneiHs.745007.

    Genome annotation databases

    EnsembliENST00000535906; ENSP00000444053; ENSG00000184056.
    GeneIDi26276.
    KEGGihsa:26276.
    UCSCiuc010uqu.1. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC068831 Genomic DNA. No translation available.
    RefSeqi NP_001276077.1. NM_001289148.1.
    UniGenei Hs.745007.

    3D structure databases

    ProteinModelPortali F5H008.
    SMRi F5H008. Positions 28-587.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000535906 ; ENSP00000444053 ; ENSG00000184056 .
    GeneIDi 26276.
    KEGGi hsa:26276.
    UCSCi uc010uqu.1. human.

    Organism-specific databases

    CTDi 26276.
    HGNCi HGNC:12712. VPS33B.
    GenAtlasi Search...

    Miscellaneous databases

    GenomeRNAii 26276.
    NextBioi 35507930.

    Gene expression databases

    ArrayExpressi F5H008.
    Bgeei F5H008.

    Family and domain databases

    Gene3Di 3.40.50.1910. 2 hits.
    InterProi IPR027482. Sec-1-like_dom2.
    IPR001619. Sec1-like.
    IPR027121. VPS33.
    [Graphical view ]
    PANTHERi PTHR11679. PTHR11679. 1 hit.
    PTHR11679:SF1. PTHR11679:SF1. 1 hit.
    Pfami PF00995. Sec1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56815. SSF56815. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
      Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
      , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
      Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
      Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
      Anal. Chem. 81:4493-4501(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiF5H008_HUMAN
    AccessioniPrimary (citable) accession number: F5H008
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3