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F5GZZ9 (F5GZZ9_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:CD163 Ensembl ENSP00000444071
OrganismHomo sapiens (Human) [Reference proteome] Ensembl ENSP00000444071
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1109 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000444071

Ontologies

Keywords
   PTMDisulfide bond SAAS SAAS017448
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionscavenger receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5GZZ9 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 50B73BFE15FD32EA

FASTA1,109120,322
        10         20         30         40         50         60 
MSLDFRRHFV NLSPFTITVV LLLSACFVTS SLGGTDKELR LVDGENKCSG RVEVKVQEEW 

        70         80         90        100        110        120 
GTVCNNGWSM EAVSVICNQL GCPTAIKAPG WANSSAGSGR IWMDHVSCRG NESALWDCKH 

       130        140        150        160        170        180 
DGWGKHSNCT HQQDAGVTCS DGSNLEMRLT RGGNMCSGRI EIKFQGRWGT VCDDNFNIDH 

       190        200        210        220        230        240 
ASVICRQLEC GSAVSFSGSS NFGEGSGPIW FDDLICNGNE SALWNCKHQG WGKHNCDHAE 

       250        260        270        280        290        300 
DAGVICSKGA DLSLRLVDGV TECSGRLEVR FQGEWGTICD DGWDSYDAAV ACKQLGCPTA 

       310        320        330        340        350        360 
VTAIGRVNAS KGFGHIWLDS VSCQGHEPAI WQCKHHEWGK HYCNHNEDAG VTCSDGSDLE 

       370        380        390        400        410        420 
LRLRGGGSRC AGTVEVEIQR LLGKVCDRGW GLKEADVVCR QLGCGSALKT SYQVYSKIQA 

       430        440        450        460        470        480 
TNTWLFLSSC NGNETSLWDC KNWQWGGLTC DHYEEAKITC SAHREPRLVG GDIPCSGRVE 

       490        500        510        520        530        540 
VKHGDTWGSI CDSDFSLEAA SVLCRELQCG TVVSILGGAH FGEGNGQIWA EEFQCEGHES 

       550        560        570        580        590        600 
HLSLCPVAPR PEGTCSHSRD VGVVCSRYTE IRLVNGKTPC EGRVELKTLG AWGSLCNSHW 

       610        620        630        640        650        660 
DIEDAHVLCQ QLKCGVALST PGGARFGKGN GQIWRHMFHC TGTEQHMGDC PVTALGASLC 

       670        680        690        700        710        720 
PSEQVASVIC SGNQSQTLSS CNSSSLGPTR PTIPEESAVA CIESGQLRLV NGGGRCAGRV 

       730        740        750        760        770        780 
EIYHEGSWGT ICDDSWDLSD AHVVCRQLGC GEAINATGSA HFGEGTGPIW LDEMKCNGKE 

       790        800        810        820        830        840 
SRIWQCHSHG WGQQNCRHKE DAGVICSEFM SLRLTSEASR EACAGRLEVF YNGAWGTVGK 

       850        860        870        880        890        900 
SSMSETTVGV VCRQLGCADK GKINPASLDK AMSIPMWVDN VQCPKGPDTL WQCPSSPWEK 

       910        920        930        940        950        960 
RLASPSEETW ITCDNKIRLQ EGPTSCSGRV EIWHGGSWGT VCDDSWDLDD AQVVCQQLGC 

       970        980        990       1000       1010       1020 
GPALKAFKEA EFGQGTGPIW LNEVKCKGNE SSLWDCPARR WGHSECGHKE DAAVNCTDIS 

      1030       1040       1050       1060       1070       1080 
VQKTPQKATT GRSSRQSSFI AVGILGVVLL AIFVALFFLT KKRRQRQRLA VSSRGENLVH 

      1090       1100 
QIQYREMNSC LNADDLDLMN SSGGHSEPH 

« Hide

References

« Hide 'large scale' references
[1]"The finished DNA sequence of human chromosome 12."
Baylor College of Medicine Human Genome Sequencing Center Sequence Production Team
Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. expand/collapse author list , Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Montgomery K.T., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.Z., Steffen D., Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H., Draper H., Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S., Kelly S.H., Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J., Santibanez J., Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q., Williams G.A., Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V., Bailey M., Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E., Burkett C.E., Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K., Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D., Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M., Dathorne S.R., David R., Davis C.M., Davy-Carroll L., Deshazo D.R., Donlin J.E., D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J., Escotto M., Flagg N., Forbes L.D., Gabisi A.M., Garza M., Hamilton C., Henderson N., Hernandez O., Hines S., Hogues M.E., Huang M., Idlebird D.G., Johnson R., Jolivet A., Jones S., Kagan R., King L.M., Leal B., Lebow H., Lee S., LeVan J.M., Lewis L.C., London P., Lorensuhewa L.M., Loulseged H., Lovett D.A., Lucier A., Lucier R.L., Ma J., Madu R.C., Mapua P., Martindale A.D., Martinez E., Massey E., Mawhiney S., Meador M.G., Mendez S., Mercado C., Mercado I.C., Merritt C.E., Miner Z.L., Minja E., Mitchell T., Mohabbat F., Mohabbat K., Montgomery B., Moore N., Morris S., Munidasa M., Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O., Nwokenkwo S., Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J., Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A., Perrin W., Pickens A., Primus E.L., Pu L.L., Puazo M., Quiles M.M., Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I., Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A., Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D., Trejos Z.Y., Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I., Vera V.A., Villasana D.M., Wang L., Ward-Moore S., Warren J.T., Wei X., White F., Williamson A.L., Wleczyk R., Wooden H.S., Wooden S.H., Yen J., Yoon L., Yoon V., Zorrilla S.E., Nelson D., Kucherlapati R., Weinstock G., Gibbs R.A., null.
Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC131206 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalF5GZZ9.
SMRF5GZZ9. Positions 36-252, 265-354, 361-461, 467-671, 702-812, 825-1018.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000541972; ENSP00000444071; ENSG00000177575.

Organism-specific databases

HGNCHGNC:1631. CD163.
GenAtlasSearch...

Gene expression databases

ArrayExpressF5GZZ9.
BgeeF5GZZ9.

Family and domain databases

Gene3D3.10.250.10. 9 hits.
InterProIPR001190. SRCR.
IPR017448. SRCR-like_dom.
[Graphical view]
PfamPF00530. SRCR. 9 hits.
[Graphical view]
PRINTSPR00258. SPERACTRCPTR.
SMARTSM00202. SR. 9 hits.
[Graphical view]
SUPFAMSSF56487. SSF56487. 9 hits.
PROSITEPS00420. SRCR_1. 4 hits.
PS50287. SRCR_2. 9 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSCD163. human.
NextBio35507923.

Entry information

Entry nameF5GZZ9_HUMAN
AccessionPrimary (citable) accession number: F5GZZ9
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 9, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.