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Protein
Submitted name:

DNA-binding protein RFXANK

Gene

RFXANK

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding protein RFXANKImported
Gene namesi
Name:RFXANKImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

EuPathDBiHostDB:ENSG00000064490.13.
HGNCiHGNC:9987. RFXANK.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000064490.

PTM / Processingi

Proteomic databases

MaxQBiF5GY33.
PeptideAtlasiF5GY33.

Expressioni

Gene expression databases

BgeeiENSG00000064490.
ExpressionAtlasiF5GY33. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliF5GY33.
SMRiF5GY33.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini101 – 188ANK_REP_REGIONInterPro annotationAdd BLAST88
Repeati101 – 133ANKPROSITE-ProRule annotationAdd BLAST33
Repeati134 – 166ANKPROSITE-ProRule annotationAdd BLAST33
Repeati167 – 188ANKPROSITE-ProRule annotationAdd BLAST22

Keywords - Domaini

ANK repeatPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00900000140947.

Family and domain databases

CDDicd00204. ANK. 1 hit.
Gene3Di1.25.40.20. 2 hits.
InterProiView protein in InterPro
IPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR036770. Ankyrin_rpt-contain_sf.
PfamiView protein in Pfam
PF12796. Ank_2. 1 hit.
SMARTiView protein in SMART
SM00248. ANK. 2 hits.
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiView protein in PROSITE
PS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 3 hits.

Sequencei

Sequence statusi: Fragment.

F5GY33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELTQPAEDL IQTQQTPASE LGDPEDPGEE AADGSDTVVL SLFPCTPEPV
60 70 80 90 100
NPEPDASVSS PQAGSSLKHS TTLTNRQRGN EVSALPATLD CDNLVNKPDE
110 120 130 140 150
RGFTPLIWAS AFGEIETVRF LLEWGADPHI LAKERESALS LASTGGYTDI
160 170 180
VGLLLERDVD INIYDWNGGT PLLYAVRGNH VKCVEALL
Length:188
Mass (Da):20,212
Last modified:January 9, 2013 - v2
Checksum:i7DE07AF3E94BDDFA
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei188Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002126 Genomic DNA. No translation available.
AC003110 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000540981; ENSP00000440325; ENSG00000064490.
UCSCiuc060vyg.1. human.

Similar proteinsi

Entry informationi

Entry nameiF5GY33_HUMAN
AccessioniPrimary (citable) accession number: F5GY33
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: January 9, 2013
Last modified: October 25, 2017
This is version 56 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported