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F5GXA4

- F5GXA4_HUMAN

UniProt

F5GXA4 - F5GXA4_HUMAN

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Protein
Submitted name:

Stereocilin

Gene

STRC

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
StereocilinImported
Gene namesi
Name:STRCImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 15

Organism-specific databases

HGNCiHGNC:16035. STRC.

Expressioni

Gene expression databases

BgeeiF5GXA4.
ExpressionAtlasiF5GXA4. baseline.

Structurei

3D structure databases

ProteinModelPortaliF5GXA4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063809.

Family and domain databases

InterProiIPR026061. Stereocilin.
IPR026664. Stereocilin_related.
[Graphical view]
PANTHERiPTHR23412. PTHR23412. 1 hit.
PTHR23412:SF16. PTHR23412:SF16. 1 hit.

Sequencei

Sequence statusi: Complete.

F5GXA4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MELLACFSPV LWDLLQREKS VWALQILVQA YLHMPPENLQ QLVLSAEREA
60 70 80 90 100
AQGFLTLMLQ GKLQGKLQVP PSEEQALGRL TALLLQRYPR LTSQLFIDLS
110 120 130 140 150
PLIPFLAVSD LMRFPPSLLA NDSVQQGYRG SEENSLEEDK GLRPMTPRSL
160 170 180 190 200
AAIRDYSPGM RPEQKEALAK RLLAPELFGE VPAWPQELLW AVLPLLPHLP
210 220 230 240 250
LENFLQLSPH QIQALEDSWP AAGLGPGHAR HVLRSLVNQS VQDGEEQVRR
260 270 280 290 300
LGPLACFLSP EELQSLVPLS DPTGPVERGL LECAANGTLS PEGRVAYELL
310 320 330 340 350
GVLRSSGGAV LSPRELRVWA PLFSQLGLRF LQELSEPQLR AMLPVLQGTS
360 370 380 390 400
VTPAQAVLLL GRLLPRHDLL QLDSLALLAN RRRYWELPWS EQQAQFLWKK
410 420 430 440 450
MQVPTNLTLR NLQALGTLAG GMSCEFLQQI NSMVDFLEVV HMIYQLPTRV
460 470 480 490 500
RGSLRACIWA ELQRRMAMPE PEWTTVGPEL NGLDSKLLLD LPIQLMDRLS
510 520 530 540 550
NESIMLVVEL VQRAPEQLLA LTPLHQAALA ERALQNLAPK ETPVSGEVLE
560 570 580 590 600
TLGPLVGFLG TESTRQIPLQ ILLSHLSQLQ GFCLGETFAT ELGWLLLQES
610 620 630 640 650
VLGKPELWSQ DEVEQAGRLV FTLSTEAISL IPREALGPET LERLLEKQQS
660 670 680 690 700
WEQSRVGQLC REPQLAAKKA ALVAGVVRPA AEDLPEPVPN CADVRGTFPA
710 720 730 740 750
AWSATQIAEM ELSDFEDCLT LFAGDPGLGP EELRAAMGKA KQLWGPPRGF
760 770 780 790 800
RPEQILQLGR LLIGLGDREL QELILVDWGV LSTLGQIDGW STTQLRIVVS
810 820 830 840 850
SFLRQSGRHV SHLDFVHLTA LGYTLCGLRP EELQHISSWE FSQAALFLGT
860 870 880 890 900
LHLQCSEEQL EVLAHLLVLP GGFGPISNWG PEIFTEIGTI AAGIPDLALS
910 920 930 940 950
ALLRGQIQGV TPLAISVIPP PKFAVVFSPI QLSSLTSAQA VAVTPEQMAF
960 970 980 990 1000
LSPEQRRAVA WAQHEGKESP EQQGRSTAWG LQDWSRPSWS LVLTISFLGH

LL
Length:1,002
Mass (Da):110,697
Last modified:June 28, 2011 - v1
Checksum:i74ED08E6FDEAD158
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011330 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000541030; ENSP00000440413; ENSG00000242866.
UCSCiuc010bdl.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011330 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali F5GXA4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000541030 ; ENSP00000440413 ; ENSG00000242866 .
UCSCi uc010bdl.3. human.

Organism-specific databases

HGNCi HGNC:16035. STRC.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00530000063809.

Miscellaneous databases

NextBioi 35507363.

Gene expression databases

Bgeei F5GXA4.
ExpressionAtlasi F5GXA4. baseline.

Family and domain databases

InterProi IPR026061. Stereocilin.
IPR026664. Stereocilin_related.
[Graphical view ]
PANTHERi PTHR23412. PTHR23412. 1 hit.
PTHR23412:SF16. PTHR23412:SF16. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
    Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
    , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
    Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF5GXA4_HUMAN
AccessioniPrimary (citable) accession number: F5GXA4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 29, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3