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F5GXA4

- F5GXA4_HUMAN

UniProt

F5GXA4 - F5GXA4_HUMAN

Protein
Submitted name:

Stereocilin

Gene

STRC

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    StereocilinImported
    Gene namesi
    Name:STRCImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 15

    Organism-specific databases

    HGNCiHGNC:16035. STRC.

    Expressioni

    Gene expression databases

    ArrayExpressiF5GXA4.
    BgeeiF5GXA4.

    Structurei

    3D structure databases

    ProteinModelPortaliF5GXA4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    InterProiIPR026061. Stereocilin.
    IPR026664. Stereocilin_related.
    [Graphical view]
    PANTHERiPTHR23412. PTHR23412. 1 hit.
    PTHR23412:SF16. PTHR23412:SF16. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F5GXA4-1 [UniParc]FASTAAdd to Basket

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    MELLACFSPV LWDLLQREKS VWALQILVQA YLHMPPENLQ QLVLSAEREA     50
    AQGFLTLMLQ GKLQGKLQVP PSEEQALGRL TALLLQRYPR LTSQLFIDLS 100
    PLIPFLAVSD LMRFPPSLLA NDSVQQGYRG SEENSLEEDK GLRPMTPRSL 150
    AAIRDYSPGM RPEQKEALAK RLLAPELFGE VPAWPQELLW AVLPLLPHLP 200
    LENFLQLSPH QIQALEDSWP AAGLGPGHAR HVLRSLVNQS VQDGEEQVRR 250
    LGPLACFLSP EELQSLVPLS DPTGPVERGL LECAANGTLS PEGRVAYELL 300
    GVLRSSGGAV LSPRELRVWA PLFSQLGLRF LQELSEPQLR AMLPVLQGTS 350
    VTPAQAVLLL GRLLPRHDLL QLDSLALLAN RRRYWELPWS EQQAQFLWKK 400
    MQVPTNLTLR NLQALGTLAG GMSCEFLQQI NSMVDFLEVV HMIYQLPTRV 450
    RGSLRACIWA ELQRRMAMPE PEWTTVGPEL NGLDSKLLLD LPIQLMDRLS 500
    NESIMLVVEL VQRAPEQLLA LTPLHQAALA ERALQNLAPK ETPVSGEVLE 550
    TLGPLVGFLG TESTRQIPLQ ILLSHLSQLQ GFCLGETFAT ELGWLLLQES 600
    VLGKPELWSQ DEVEQAGRLV FTLSTEAISL IPREALGPET LERLLEKQQS 650
    WEQSRVGQLC REPQLAAKKA ALVAGVVRPA AEDLPEPVPN CADVRGTFPA 700
    AWSATQIAEM ELSDFEDCLT LFAGDPGLGP EELRAAMGKA KQLWGPPRGF 750
    RPEQILQLGR LLIGLGDREL QELILVDWGV LSTLGQIDGW STTQLRIVVS 800
    SFLRQSGRHV SHLDFVHLTA LGYTLCGLRP EELQHISSWE FSQAALFLGT 850
    LHLQCSEEQL EVLAHLLVLP GGFGPISNWG PEIFTEIGTI AAGIPDLALS 900
    ALLRGQIQGV TPLAISVIPP PKFAVVFSPI QLSSLTSAQA VAVTPEQMAF 950
    LSPEQRRAVA WAQHEGKESP EQQGRSTAWG LQDWSRPSWS LVLTISFLGH 1000
    LL 1002
    Length:1,002
    Mass (Da):110,697
    Last modified:June 28, 2011 - v1
    Checksum:i74ED08E6FDEAD158
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC011330 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000541030; ENSP00000440413; ENSG00000242866.
    UCSCiuc010bdl.3. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC011330 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali F5GXA4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000541030 ; ENSP00000440413 ; ENSG00000242866 .
    UCSCi uc010bdl.3. human.

    Organism-specific databases

    HGNCi HGNC:16035. STRC.
    GenAtlasi Search...

    Miscellaneous databases

    NextBioi 35507363.

    Gene expression databases

    ArrayExpressi F5GXA4.
    Bgeei F5GXA4.

    Family and domain databases

    InterProi IPR026061. Stereocilin.
    IPR026664. Stereocilin_related.
    [Graphical view ]
    PANTHERi PTHR23412. PTHR23412. 1 hit.
    PTHR23412:SF16. PTHR23412:SF16. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
      Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
      , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
      Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiF5GXA4_HUMAN
    AccessioniPrimary (citable) accession number: F5GXA4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3