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F5GWY5 (F5GWY5_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length560 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000440518

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
F5GWY5 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 62FDEB501B256675

FASTA56058,865
        10         20         30         40         50         60 
MRCALALSAL LLLLSTPPLL PSSPSPSPSP SQNETATQTT TDSSNKTAPT PASSVTIMAT 

        70         80         90        100        110        120 
DTAQQSTVPT SKANEILASV KATTLGVSSD SPGTTTLAQQ VSGPVNTTVA RGGGSGNPTT 

       130        140        150        160        170        180 
TIESPKSTKS ADTTTVATST ATAKPNTTSS QNGAEDTTNS GGKSSHSVTT DLTSTKAEHL 

       190        200        210        220        230        240 
TTPHPTSPLS PRQPTSTHPV ATPTSSGHDH LMKISSSSST VAIPGYTFTS PGMTTTLLET 

       250        260        270        280        290        300 
VFHHVSQAGL ELLTSGDLPT LASQSAGITA SSVISQRTQQ TSSQMPASST APSSQETVQP 

       310        320        330        340        350        360 
TSPATALRTP TLPETMSSSP TAASTTHRYP KTPSPTVAHE SNWAKCEDLE TQTQSEKQLV 

       370        380        390        400        410        420 
LNLTGNTLCA GGASDEKLIS LICRAVKATF NPAQDKCGIR LASVPGSQTV VVKEITIHTK 

       430        440        450        460        470        480 
LPAKDVYERL KDKWDELKEA GVSDMKLGDQ GPPEEAEDRF SMPLIITIVC MASFLLLVAA 

       490        500        510        520        530        540 
LYGCCHQRLS QRKDQQRLTE ELQTVENGYH DNPTLEVMET SSEMQEKKVV SLNGELGDSW 

       550        560 
IVPLDNLTKD DLDEEEDTHL 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence of human chromosome 7."
Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. expand/collapse author list , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC008264 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalF5GWY5.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEF5GWY5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000541194; ENSP00000440518; ENSG00000128567.

Organism-specific databases

HGNCHGNC:9171. PODXL.
GenAtlasSearch...

Phylogenomic databases

OMAQTSSQMP.

Gene expression databases

ArrayExpressF5GWY5.
BgeeF5GWY5.

Family and domain databases

InterProIPR013836. CD34/Podocalyxin.
IPR017403. Podocalyxin-like_p1.
[Graphical view]
PfamPF06365. CD34_antigen. 1 hit.
[Graphical view]
PIRSFPIRSF038143. Podocalyxin-like_p1. 1 hit.
ProtoNetSearch...

Other

ChiTaRSPODXL. human.
NextBio35507285.

Entry information

Entry nameF5GWY5_HUMAN
AccessionPrimary (citable) accession number: F5GWY5
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: March 19, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.