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F4MP39 (F4MP39_MYCML) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F4MP39 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 908B9E1844E6070E

FASTA39543,304
        10         20         30         40         50         60 
MAKEQFDRSL PHVNIGTIGH VDHGKTTLTA AITKVLSEQG NAEFKDYANI DNAPEERERG 

        70         80         90        100        110        120 
ITINTAHVEY KTANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPK IVVFLNKCDM VEDDEMIDLV EMEIRDLLTE YDFDGEGAPV IRGSALGALN 

       190        200        210        220        230        240 
GDSKWTGAIN ELMAAVDEYI PTPQRDADKT FLMPVEDVFT ITGRGTVATG RVERGTVKVN 

       250        260        270        280        290        300 
EEVEIIGLKE EPTKTVVTGL EMFRKLLDFA VAGDNVGALL RGVDRHSVER GQVLAKPGTI 

       310        320        330        340        350        360 
KPHTVLKASV YALTQEEGGR HKPFFNKYRP QFYFRTTDVT GEVTLPEGTD MVMPGDNVEM 

       370        380        390 
EIQLIKPVAV EEGTKFSIRE GGRTIGAGTV ISIEK 

« Hide

References

[1]Genoscope - CEA
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 95010 EMBL CBW53871.1.
[2]"Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective."
Thiaucourt F., Manso-Silvan L., Salah W., Barbe V., Berger A., Jacob D., Breton M., Dupuy V., Lomenech A.M., Blanchard A., Sirand-Pugnet P.
BMC Genomics 0:0-0(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 95010 EMBL CBW53871.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ377874 Genomic DNA. Translation: CBW53871.1.
RefSeqYP_004399850.1. NC_015431.1.

3D structure databases

ProteinModelPortalF4MP39.
SMRF4MP39. Positions 2-393.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEF4MP39.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBW53871; CBW53871; MLC_1430.
GeneID10548645.
KEGGmml:MLC_1430.
PATRIC54452897. VBIMycMyc166249_0144.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycMMYC862259:GI4X-149-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4MP39_MYCML
AccessionPrimary (citable) accession number: F4MP39
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: June 11, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)