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F4M4S8 (F4M4S8_ECOLX) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
4-aminobutyrate transaminase GabT EMBL AEE56235.1
Gene names
Name:gabT EMBL AEE56235.1
ORF Names:UMNK88_1638 EMBL AEE56235.1
OrganismEscherichia coli UMNK88 EMBL AEE56235.1
Taxonomic identifier696406 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length429 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Sequences

Sequence LengthMass (Da)Tools
F4M4S8 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 58A60287F8725FA2

FASTA42945,352
        10         20         30         40         50         60 
MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA VLNTGHRHPD 

        70         80         90        100        110        120 
LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG QAKTAFFTTG AEAVENAVKI 

       130        140        150        160        170        180 
ARAHTGRPGV IAFSGGFHGR TYMTMALTGK VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ 

       190        200        210        220        230        240 
DSLDAIERLF KSDIEAKQVA AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV 

       250        260        270        280        290        300 
QSGFARTGKL FAMDHYADKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN 

       310        320        330        340        350        360 
PLAVAAAHAV LNIIDKESLC ERANQLGQRL TNTLIDAKES VPAIAAVRGL GSMIAAEFND 

       370        380        390        400        410        420 
PQTGEPSAAI AQKNPATRAG AGAAPADLWR IRQRDSLPVS ADHPGCAIRC GNENFAGCAE 


RLIAQRNNV

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References

[1]"Genome structure of porcine enterotoxigenic Escherichia coli."
Johnson T.J., Shepard S.M., Isaacson R.E.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: UMNK88 EMBL AEE56235.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002729 Genomic DNA. Translation: AEE56235.1.
RefSeqYP_006133398.1. NC_017641.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE56235; AEE56235; UMNK88_1638.
GeneID12684916.
KEGGeun:UMNK88_1638.
PATRIC48570994. VBIEscCol159162_1606.

Phylogenomic databases

KOK00823.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4M4S8_ECOLX
AccessionPrimary (citable) accession number: F4M4S8
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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