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F4LW83

- F4LW83_TEPAE

UniProt

F4LW83 - F4LW83_TEPAE

Protein

50S ribosomal protein L20

Gene

rplT

Organism
Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Keywords - Ligandi

    RNA-binding, rRNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciTSP499229:GHS2-695-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L20UniRule annotation
    Gene namesi
    Name:rplTUniRule annotationImported
    Ordered Locus Names:TepiRe1_0732Imported, TepRe1_0672Imported
    OrganismiTepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1)Imported
    Taxonomic identifieri1209989 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacteraceaeTepidanaerobacter
    ProteomesiUP000010802: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L20P family.UniRule annotation

    Phylogenomic databases

    KOiK02887.

    Family and domain databases

    HAMAPiMF_00382. Ribosomal_L20.
    InterProiIPR005813. Ribosomal_L20.
    [Graphical view]
    PANTHERiPTHR10986. PTHR10986. 1 hit.
    PfamiPF00453. Ribosomal_L20. 1 hit.
    [Graphical view]
    PRINTSiPR00062. RIBOSOMALL20.
    TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
    PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F4LW83-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARVKKGVTA RKKHKKVIKL AKGYRGSKSK LFRPANQAVL KAQSHAYRGR    50
    KLKKRDFRKL WIARINAAAR SNGISYSKFI NGLKKAGVQI NRKMLSEMAI 100
    NDANGFTQLV DIAKANSK 118
    Length:118
    Mass (Da):13,255
    Last modified:June 28, 2011 - v1
    Checksum:iC28AAA1BA67A470B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002728 Genomic DNA. Translation: AEE90859.1.
    HF563609 Genomic DNA. Translation: CDI40469.1.
    RefSeqiWP_013777782.1. NC_019954.2.
    YP_004460166.1. NC_015519.1.
    YP_008618714.1. NC_019954.2.

    Genome annotation databases

    EnsemblBacteriaiAEE90859; AEE90859; TepRe1_0672.
    GeneIDi10597433.
    17374301.
    KEGGitae:TepiRe1_0732.
    tep:TepRe1_0672.
    PATRICi54624276. VBITepSp18581_0695.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002728 Genomic DNA. Translation: AEE90859.1 .
    HF563609 Genomic DNA. Translation: CDI40469.1 .
    RefSeqi WP_013777782.1. NC_019954.2.
    YP_004460166.1. NC_015519.1.
    YP_008618714.1. NC_019954.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEE90859 ; AEE90859 ; TepRe1_0672 .
    GeneIDi 10597433.
    17374301.
    KEGGi tae:TepiRe1_0732.
    tep:TepRe1_0672.
    PATRICi 54624276. VBITepSp18581_0695.

    Phylogenomic databases

    KOi K02887.

    Enzyme and pathway databases

    BioCyci TSP499229:GHS2-695-MONOMER.

    Family and domain databases

    HAMAPi MF_00382. Ribosomal_L20.
    InterProi IPR005813. Ribosomal_L20.
    [Graphical view ]
    PANTHERi PTHR10986. PTHR10986. 1 hit.
    Pfami PF00453. Ribosomal_L20. 1 hit.
    [Graphical view ]
    PRINTSi PR00062. RIBOSOMALL20.
    TIGRFAMsi TIGR01032. rplT_bact. 1 hit.
    PROSITEi PS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Tepidanaerobacter sp. Re1."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Pagani I., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Lcollab F.I., Woyke T.
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Re1Imported.
    2. "First Genome Sequence of a Syntrophic Acetate-Oxidizing Bacterium, Tepidanaerobacter acetatoxydans Strain Re1."
      Manzoor S., Bongcam-Rudloff E., Schnurer A., Muller B.
      Genome Announc. 1:e00213-e00212(2013)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Re1Imported.
    3. "First genome sequence of a syntrophic acetate-oxidizing bacterium, Tepidanaerobacter acetatoxydans strain Re1."
      Manzoor S., Bongcam-Rudloff E., Schnurer A., Muller B.
      Genome Announc. 1:E00213-E00213(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiF4LW83_TEPAE
    AccessioniPrimary (citable) accession number: F4LW83
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3