F4LW83 (F4LW83_TEPAE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20 RuleBase RU000560 HAMAP-Rule MF_00382

Gene names

Name:	rplT HAMAP-Rule MF_00382
Ordered Locus Names:	TepRe1_0672 EMBL AEE90859.1

Organism

Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) [Complete proteome] [HAMAP]

Taxonomic identifier

499229 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacteraceae › Tepidanaerobacter

Protein attributes

Sequence length	118 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. RuleBase RU000560 HAMAP-Rule MF_00382
Sequence similarities	Belongs to the ribosomal protein L20P family. RuleBase RU000560 HAMAP-Rule MF_00382

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding RuleBase RU000560 HAMAP-Rule MF_00382
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000560 HAMAP-Rule MF_00382 EMBL AEE90859.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosomal large subunit assembly Inferred from electronic annotation. Source: HAMAP translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F4LW83 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: C28AAA1BA67A470B	FASTA	118	13,255
	10 20 30 40 50 60 MARVKKGVTA RKKHKKVIKL AKGYRGSKSK LFRPANQAVL KAQSHAYRGR KLKKRDFRKL 70 80 90 100 110 WIARINAAAR SNGISYSKFI NGLKKAGVQI NRKMLSEMAI NDANGFTQLV DIAKANSK

References

[1]

"Complete sequence of Tepidanaerobacter sp. Re1." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Pagani I., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Lcollab F.I., Woyke T. Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 21804 / JCM 16047 / Re1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002728 Genomic DNA. Translation: AEE90859.1.
RefSeq	YP_004460166.1. NC_015519.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEE90859; AEE90859; TepRe1_0672.
GeneID	10597433.
KEGG	tep:TepRe1_0672.
PATRIC	54624276. VBITepSp18581_0695.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02887.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F4LW83_TEPAE

Accession

Primary (citable) accession number: F4LW83

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)