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Protein
Submitted name:

Ribosomal protein L20

Gene

rplT

Organism
Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. ribosomal large subunit assembly Source: UniProtKB-HAMAP
  2. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

BioCyciTSP499229:GHS2-695-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein L20Imported
Gene namesi
Name:rplTImported
Ordered Locus Names:TepiRe1_0732Imported
OrganismiTepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1)Imported
Taxonomic identifieri1209989 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacteraceaeTepidanaerobacter
ProteomesiUP000010802 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK02887.
OMAiRKNRCYS.

Family and domain databases

HAMAPiMF_00382. Ribosomal_L20.
InterProiIPR005813. Ribosomal_L20.
[Graphical view]
PANTHERiPTHR10986. PTHR10986. 1 hit.
PfamiPF00453. Ribosomal_L20. 1 hit.
[Graphical view]
PRINTSiPR00062. RIBOSOMALL20.
TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4LW83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARVKKGVTA RKKHKKVIKL AKGYRGSKSK LFRPANQAVL KAQSHAYRGR
60 70 80 90 100
KLKKRDFRKL WIARINAAAR SNGISYSKFI NGLKKAGVQI NRKMLSEMAI
110
NDANGFTQLV DIAKANSK
Length:118
Mass (Da):13,255
Last modified:June 27, 2011 - v1
Checksum:iC28AAA1BA67A470B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HF563609 Genomic DNA. Translation: CDI40469.1.
RefSeqiYP_004460166.1. NC_015519.1.
YP_008618714.1. NC_019954.2.

Genome annotation databases

EnsemblBacteriaiAEE90859; AEE90859; TepRe1_0672.
CDI40469; CDI40469; TepiRe1_0732.
KEGGitae:TepiRe1_0732.
tep:TepRe1_0672.
PATRICi54624276. VBITepSp18581_0695.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HF563609 Genomic DNA. Translation: CDI40469.1.
RefSeqiYP_004460166.1. NC_015519.1.
YP_008618714.1. NC_019954.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEE90859; AEE90859; TepRe1_0672.
CDI40469; CDI40469; TepiRe1_0732.
KEGGitae:TepiRe1_0732.
tep:TepRe1_0672.
PATRICi54624276. VBITepSp18581_0695.

Phylogenomic databases

KOiK02887.
OMAiRKNRCYS.

Enzyme and pathway databases

BioCyciTSP499229:GHS2-695-MONOMER.

Family and domain databases

HAMAPiMF_00382. Ribosomal_L20.
InterProiIPR005813. Ribosomal_L20.
[Graphical view]
PANTHERiPTHR10986. PTHR10986. 1 hit.
PfamiPF00453. Ribosomal_L20. 1 hit.
[Graphical view]
PRINTSiPR00062. RIBOSOMALL20.
TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "First genome sequence of a syntrophic acetate-oxidizing bacterium, Tepidanaerobacter acetatoxydans strain Re1."
    Manzoor S., Bongcam-Rudloff E., Schnurer A., Muller B.
    Genome Announc. 1:E00213-E00213(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiF4LW83_TEPAE
AccessioniPrimary (citable) accession number: F4LW83
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2011
Last sequence update: June 27, 2011
Last modified: March 31, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.