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F4LHE3 (F4LHE3_BORPC) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BPTD_1316 EMBL AEE66706.1
OrganismBordetella pertussis (strain CS) [Complete proteome] [HAMAP] EMBL AEE66706.1
Taxonomic identifier1017264 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length1113 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F4LHE3 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 7235BDC938E49756

FASTA1,113124,137
        10         20         30         40         50         60 
MPATHPAPDP LWYKDAVIYQ LHVKSFFDAN DDGVGDFAGL LAKLDYIVEL GVNTIWLLPF 

        70         80         90        100        110        120 
YPSPRRDDGY DIADYRGVHP DYGSLADARL LVRAAHARGL RVITELVINH TSDQHPWFQR 

       130        140        150        160        170        180 
ARAARPGSAH RAYYVWSDDD KAYAGTRIIF CDTEKSNWTW DPVAGAYFWH RFYSHQPDLN 

       190        200        210        220        230        240 
YDNPQVLREV LGAMRYWLDM GVDGLRLDAV PYLVEREGTN NENLPETHAI LRRIRRVIDS 

       250        260        270        280        290        300 
EYPGRMLLAE ANQWPEDAQE YFGAGDECHM AFHFPLMPRM YMAIAQEDRL PVTDIIRQTP 

       310        320        330        340        350        360 
SIAPQCQWAI FLRNHDELTL EMVTSRERDY LWNVYAAEPR ARINLGIRRR LAPLLERDRR 

       370        380        390        400        410        420 
RIELMNSLLL SMPGTPVLYY GDELGMGDNI HLGDRDGVRT PMQWSPDRNG GFSRADPERL 

       430        440        450        460        470        480 
PLPLLMGPLY GYEAVNVEAQ QRDPHSLLNW TRRMLAKRRQ SHVFGRGELS FLYPGNRKIL 

       490        500        510        520        530        540 
AYLRTWEDTV VLCVANLSQA AQPVELHLSE YAGRVPVEML GGTAFPQIGE LPYLLTLPPF 

       550        560        570        580        590        600 
GFYWLDLSAG AAPPAWHSEL PPQMPESITL VSRGAGAALR LTEASRRQLE ADVLPAYLQR 

       610        620        630        640        650        660 
QRWYAARRKP GVMRLAYSVP LNDDVESYYE AEIEVSDDGP PRRFHTPVAL AWQDDTAAQY 

       670        680        690        700        710        720 
PLARVRRGAQ LGTLTDASLQ PGYARVLLAA LTAGRDIQAG GEPAVRLRFL PEPGLADLAL 

       730        740        750        760        770        780 
RDDSEVRALS ADQSNSSLLV GERVVFKLLR ELHAGPHPEA EMTRYLTQAG YAHTPALLGE 

       790        800        810        820        830        840 
VVRVQGDQAP HTLALAHAYV VNEGDAWNWT VAYLKRTLDA AILTGASADD YQQELAGYEV 

       850        860        870        880        890        900 
LAGTIGQRLA QMHSVLARAG ELPGFAPRPA SERDAALAGE RAVAQLDRAL QALRACESGL 

       910        920        930        940        950        960 
APASHACAQW LFEHRDRLAA HIMTLAQAET GALRIRVHGD FHLGQILVAQ TDAYLIDFEG 

       970        980        990       1000       1010       1020 
EPARPMAERR QLSSPFKDVA GILRSFDYAV AELSRDDPLG GAPRDFNTGV AEPADPASAP 

      1030       1040       1050       1060       1070       1080 
RETREALLAR FRQRAGAALL ASYGNAIDPV LALPPERAQA LTCLYLLEKA AYEICYESAY 

      1090       1100       1110 
RPERLPVPIH GLAETARAAL LAAAVDHDEG PAP 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Bordetella pertussis CS, a Chinese pertussis vaccine strain."
Zhang S., Xu Y., Zhou Z., Wang S., Yang R., Wang J., Wang L.
J. Bacteriol. 193:4017-4018(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CS EMBL AEE66706.1.
[2]"Complete genome sequence of B. pertussis CS, Chinese pertussis vaccine strain."
Zhang S., Xu Y., Zhou Z., Wang S., Yang R., Wang J., Wang L.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002695 Genomic DNA. Translation: AEE66706.1.
RefSeqYP_005589484.1. NC_017223.1.

3D structure databases

ProteinModelPortalF4LHE3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE66706; AEE66706; BPTD_1316.
GeneID12161425.
KEGGbpc:BPTD_1316.
PATRIC54329461. VBIBorPer192275_1411.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.
OMAGTRIIFT.

Enzyme and pathway databases

BioCycBPER1017264:GL9D-1335-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4LHE3_BORPC
AccessionPrimary (citable) accession number: F4LHE3
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)