F4L274 (F4L274_HALH1) Unreviewed, UniProtKB/TrEMBL
Last modified
April 3, 2013.
Version 15.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Superoxide dismutase RuleBase RU000414 EC=1.15.1.1 RuleBase RU000414 | ||
| Gene names |
| ||
| Organism | Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) [Complete proteome] [HAMAP] EMBL AEE51681.1 | ||
| Taxonomic identifier | 760192 [NCBI] | ||
| Taxonomic lineage | Bacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Saprospiraceae › Haliscomenobacter › ![]() |
Protein attributes
| Sequence length | 241 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414 |
| Catalytic activity | 2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414 |
| Sequence similarities | Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477 |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal EMBL AEE51681.1 |
| Molecular function | Oxidoreductase RuleBase RU000414 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | superoxide metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular_function | metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 26 | 26 | Potential EMBL AEE51681.1 | |||||
| Chain | 27 – 241 | 215 | Potential | PRO_5000743452 | ||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete genome sequence of Haliscomenobacter hydrossis type strain (O)." US DOE Joint Genome Institute (JGI-PGF) Daligault H., Lapidus A., Zeytun A., Nolan M., Lucas S., Del Rio T.G., Tice H., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Ivanova N., Huntemann M., Mavromatis K., Mikhailova N. Woyke T.Stand. Genomic Sci. 4:352-360(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27775 / DSM 1100 / LMG 10767 / O. |
| [2] | "Complete sequence of chromosome of Haliscomenobacter hydrossis DSM 1100." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Pagani I., Daligault H., Detter J.C., Han C., Land M., Hauser L., Markowitz V. Eisen J.A.Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM 1100. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002691 Genomic DNA. Translation: AEE51681.1. |
| RefSeq | YP_004448554.1. NC_015510.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | AEE51681; AEE51681; Halhy_3829. |
| GeneID | 10588014. |
| KEGG | hhy:Halhy_3829. |
| PATRIC | 54604466. VBIHalHyd147579_4062. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| KO | K04564. |
Enzyme and pathway databases | |
| BioCyc | HHYD760192:GI21-4173-MONOMER. |
Family and domain databases | |
| InterPro | IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view] |
| PANTHER | PTHR11404. PTHR11404. 1 hit. |
| Pfam | PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view] |
| PIRSF | PIRSF000349. SODismutase. 1 hit. |
| PRINTS | PR01703. MNSODISMTASE. |
| SUPFAM | SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit. |
| PROSITE | PS00088. SOD_MN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | F4L274_HALH1 | ||||||||
| Accession | Primary (citable) accession number: F4L274 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
