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F4KM99 (F4KM99_PORAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length539 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionOxidoreductase EMBL AEE12218.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processNAD biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionL-aspartate oxidase activity

Inferred from electronic annotation. Source: EC

L-aspartate:fumarate oxidoreductase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4KM99 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 8AA988284FA5638B

FASTA53959,286
        10         20         30         40         50         60 
MKLQQSPQRY DYIIIGGGLA GLYCAYFLAQ HGSVALIARR TIEESNSYYA QGGMAAVTDQ 

        70         80         90        100        110        120 
EDSPTDHYED TIVAGRGLCI PEAVKILTDE APERINELIQ MGMTFDSEDG HLALGLEGGH 

       130        140        150        160        170        180 
HHRRILHAGG DATGRLVTTF MIEQVRKAQH ITIFDHHSAV QVLRSADGSH CQGLVTYDER 

       190        200        210        220        230        240 
AHHYDTILAS AVVLATGGAA ALYYPTTNPP TALGDGLWLA SEVGAELMDL EFIQFHPTAL 

       250        260        270        280        290        300 
YLPGYASFLI SEAVRGEGAY LVDKHGERFM PALHPLAELA PRDVVARSIF LKMQEEGTDH 

       310        320        330        340        350        360 
VRLRLRHIDP KRLLQRFPTI SEHCRQLGLD ITDEIPVAPA AHYTVGGIGV DLNGCTRLPG 

       370        380        390        400        410        420 
LYAVGEVSST GVMGANRLAS NSLIECIVFG KRIADYAIAH PITPTDTASL AVPTNLPDLS 

       430        440        450        460        470        480 
WSLDKEQIYA LEEQTKISRQ MGDILMSRVG IIRSKEGLIE ALHALQHLSD TLAEDAQHSI 

       490        500        510        520        530 
HAYMTRRRVE VAHMMAHAAL LREESRGGHY RSDYTETLPE SEAYRTRLLD GEITHQPIN

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References

[1]"The complete genome of Porphyromonas asaccharolytica DSM 20707."
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Pagani I., Lu M., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25260 / DSM 20707 / VPI 4198.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002689 Genomic DNA. Translation: AEE12218.1.
RefSeqYP_004441386.1. NC_015501.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE12218; AEE12218; Poras_0264.
GeneID10574723.
KEGGpah:Poras_0264.
PATRIC54587617. VBIPorAsa172508_0254.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00278.
OMAGERCLGA.

Enzyme and pathway databases

BioCycPASA879243:GJ3V-270-MONOMER.

Family and domain databases

Gene3D1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProIPR003953. FAD_bind_dom.
IPR013027. FAD_pyr_nucl-diS_OxRdtase.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR005288. NadB.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
[Graphical view]
PfamPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
PRINTSPR00368. FADPNR.
SUPFAMSSF56425. SSF56425. 1 hit.
SSF46977. Succ_DH_flav_C. 1 hit.
TIGRFAMsTIGR00551. nadB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4KM99_PORAD
AccessionPrimary (citable) accession number: F4KM99
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 29, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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