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Protein
Submitted name:

YCF49-like protein

Gene

At4g22830

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
YCF49-like proteinImported
Gene namesi
Ordered Locus Names:At4g22830Imported
ORF Names:F7H19.1Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G22830.
TAIRilocus:2132659. AT4G22830.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei58 – 77HelicalSequence analysisAdd BLAST20
Transmembranei105 – 125HelicalSequence analysisAdd BLAST21
Transmembranei137 – 157HelicalSequence analysisAdd BLAST21
Transmembranei163 – 186HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF4JMN0.

Expressioni

Gene expression databases

ExpressionAtlasiF4JMN0. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G22830.2.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IZH6. Eukaryota.
ENOG4111V3J. LUCA.
InParanoidiF4JMN0.
OMAiTFITAGP.
OrthoDBiEOG09360PGQ.

Family and domain databases

InterProiView protein in InterPro
IPR019634. Uncharacterised_Ycf49.
PfamiView protein in Pfam
PF10693. DUF2499. 1 hit.

Sequencei

Sequence statusi: Complete.

F4JMN0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKDGSTANR FKIKPELGNW KLEKNLSHGD CFNSHPSSLT TSNEPVIRIR
60 70 80 90 100
SRSLIHDPVA LSGLIGTSLV AAAFITAGPD ATALAAVVDS LQLSEPSNAL
110 120 130 140 150
SLPTWAVHVS SVVEWITAMA LVWKYGERKG YESWKGLSWG MVPLLGGALC
160 170 180 190 200
ACTWHFFYND ESLEVLVALQ AALTVFGNIT LCIAAFRINK LSSKIEVSEK

P
Length:201
Mass (Da):21,771
Last modified:June 28, 2011 - v1
Checksum:iFAFD728F2523FF19
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002687 Genomic DNA. Translation: AEE84664.1.
RefSeqiNP_001190803.1. NM_001203874.1.
UniGeneiAt.32491.

Genome annotation databases

EnsemblPlantsiAT4G22830.2; AT4G22830.2; AT4G22830.
GeneIDi828382.
GrameneiAT4G22830.2; AT4G22830.2; AT4G22830.
KEGGiath:AT4G22830.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiF4JMN0_ARATH
AccessioniPrimary (citable) accession number: F4JMN0
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: June 7, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported