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F4JKI3

- DGK6_ARATH

UniProt

F4JKI3 - DGK6_ARATH

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Protein
Diacylglycerol kinase 6
Gene
DGK6, At4g28130, F26K10.10, T13J8.230
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Phosphorylates the second messenger diacylglycerol (DAG) to generate phosphatidic acid (PA), another important signaling molecule. PA is required for plant development and responses to abiotic stress and pathogen attack. May be involved in the accumulation of PA during cold stress.1 Publication

Catalytic activityi

ATP + 1,2-diacyl-sn-glycerol = ADP + 1,2-diacyl-sn-glycerol 3-phosphate.

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. NAD+ kinase activity Source: InterPro
  3. diacylglycerol kinase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. defense response Source: UniProtKB-KW
  2. protein kinase C-activating G-protein coupled receptor signaling pathway Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Plant defense, Stress response

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Diacylglycerol kinase 6 (EC:2.7.1.107)
Short name:
AtDGK6
Short name:
DAG kinase 6
Alternative name(s):
Diglyceride kinase 6
Short name:
DGK 6
Gene namesi
Name:DGK6
Ordered Locus Names:At4g28130
ORF Names:F26K10.10, T13J8.230
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G28130.

Subcellular locationi

GO - Cellular componenti

  1. chloroplast Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 466466Diacylglycerol kinase 6
PRO_0000422114Add
BLAST

Proteomic databases

PRIDEiF4JKI3.

Interactioni

Subunit structurei

Monomer By similarity.

Protein-protein interaction databases

STRINGi3702.AT4G28130.1-P.

Structurei

3D structure databases

ProteinModelPortaliF4JKI3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini43 – 194152DAGKc
Add
BLAST

Sequence similaritiesi

Contains 1 DAGKc domain.

Phylogenomic databases

KOiK00901.
OMAiNDLHIPQ.

Family and domain databases

InterProiIPR016064. ATP-NAD_kinase_PpnK-typ.
IPR000756. Diacylglycerol_kin_accessory.
IPR001206. Diacylglycerol_kinase_cat_dom.
[Graphical view]
PfamiPF00609. DAGK_acc. 1 hit.
PF00781. DAGK_cat. 1 hit.
[Graphical view]
SMARTiSM00045. DAGKa. 1 hit.
SM00046. DAGKc. 1 hit.
[Graphical view]
SUPFAMiSSF111331. SSF111331. 2 hits.
PROSITEiPS50146. DAGK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4JKI3-1 [UniParc]FASTAAdd to Basket

« Hide

MVQSETSMEK YKNLSDFLKK FFIPSYVLSP EDEPEAQISC TTAPENPILV    50
FINSKSGGQL GAELILTYRT LLNDKQVFDL EVETPDKVLQ RIYLNLERLK 100
DDSLASKIRD KLKIIVAGGD GTAGWLLGVV SDLNLSNPPP IATVPLGTGN 150
NLPFAFGWGK KNPGTDRSSV ESFLGKVINA KEMKIDNWKI LMRMKHPKEG 200
SCDITLKLPH SLPRIFPSDQ ENMEGYHTYR GGFWNYFSLG MDAQVSYAFH 250
SQRKLHPERF KNQLVNQSTY LKLSCTQGWF FASLFHPSSQ NIAKLAKIQI 300
CDRNGQWNDL HIPQSIRSIV CLNLPSFSGG LNPWGTPNPK KQRDRSLTAP 350
FVDDGLIEIV GFRNAWHGLI LLSPNGHGTR LAQANRVRLE FKKGAAKHAY 400
MRIDGEPWKQ PLPSNDETVM VEISHHGQVN MLATQNCRSK SMYESSSIIR 450
FSNDEDDSSV VENEEF 466
Length:466
Mass (Da):52,490
Last modified:June 28, 2011 - v1
Checksum:iC94BA5687CFFF252
GO

Sequence cautioni

The sequence CAB36781.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAB79614.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAB79615.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL035524 Genomic DNA. Translation: CAB36781.1. Sequence problems.
AL161572 Genomic DNA. Translation: CAB79614.1. Sequence problems.
AL161572 Genomic DNA. Translation: CAB79615.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE85443.1.
PIRiC85327.
D85327.
T02913.
T09029.
RefSeqiNP_194542.2. NM_118953.2.
UniGeneiAt.54533.

Genome annotation databases

EnsemblPlantsiAT4G28130.1; AT4G28130.1; AT4G28130.
GeneIDi828928.
KEGGiath:AT4G28130.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL035524 Genomic DNA. Translation: CAB36781.1 . Sequence problems.
AL161572 Genomic DNA. Translation: CAB79614.1 . Sequence problems.
AL161572 Genomic DNA. Translation: CAB79615.1 . Sequence problems.
CP002687 Genomic DNA. Translation: AEE85443.1 .
PIRi C85327.
D85327.
T02913.
T09029.
RefSeqi NP_194542.2. NM_118953.2.
UniGenei At.54533.

3D structure databases

ProteinModelPortali F4JKI3.
ModBasei Search...

Protein-protein interaction databases

STRINGi 3702.AT4G28130.1-P.

Proteomic databases

PRIDEi F4JKI3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT4G28130.1 ; AT4G28130.1 ; AT4G28130 .
GeneIDi 828928.
KEGGi ath:AT4G28130.

Organism-specific databases

TAIRi AT4G28130.

Phylogenomic databases

KOi K00901.
OMAi NDLHIPQ.

Family and domain databases

InterProi IPR016064. ATP-NAD_kinase_PpnK-typ.
IPR000756. Diacylglycerol_kin_accessory.
IPR001206. Diacylglycerol_kinase_cat_dom.
[Graphical view ]
Pfami PF00609. DAGK_acc. 1 hit.
PF00781. DAGK_cat. 1 hit.
[Graphical view ]
SMARTi SM00045. DAGKa. 1 hit.
SM00046. DAGKc. 1 hit.
[Graphical view ]
SUPFAMi SSF111331. SSF111331. 2 hits.
PROSITEi PS50146. DAGK. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Rapid phosphatidic acid accumulation in response to low temperature stress in Arabidopsis is generated through diacylglycerol kinase."
    Arisz S.A., van Wijk R., Roels W., Zhu J.K., Haring M.A., Munnik T.
    Front. Plant Sci. 4:1-1(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.

Entry informationi

Entry nameiDGK6_ARATH
AccessioniPrimary (citable) accession number: F4JKI3
Secondary accession number(s): Q9M0J4, Q9SUC8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 2013
Last sequence update: June 28, 2011
Last modified: June 11, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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