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Protein
Submitted name:

Hydroxyproline-rich glycoprotein family protein

Gene

CHUP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Hydroxyproline-rich glycoprotein family proteinImported
Gene namesi
Name:CHUP1Imported
Synonyms:AtCHUP1Imported
Ordered Locus Names:At3g25690Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G25690.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_500330962419 – 863Sequence analysisAdd BLAST845

Proteomic databases

PaxDbiF4JA42.

Expressioni

Gene expression databases

ExpressionAtlasiF4JA42. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliF4JA42.
SMRiF4JA42.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili62 – 89Sequence analysisAdd BLAST28
Coiled coili118 – 199Sequence analysisAdd BLAST82

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IGMN. Eukaryota.
ENOG4111F63. LUCA.

Sequencei

Sequence statusi: Complete.

F4JA42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVRIGFVVA ASIAAVTVKR LNVKPSKPSK PSDNGEGGDK EQSVDPDYNL
60 70 80 90 100
NDKNLQEELS QNGIVRKELE VARNKIKELQ RQIQLDANQT KGQLLLLKQH
110 120 130 140 150
VSSLQMKEEE AMNKDTEVER KLKAVQDLEV QVMELKRKNR ELQHEKRELS
160 170 180 190 200
IKLDSAEARI ATLSNMTESD KVAKVREEVN NLKHNNEDLL KQVEGLQMNR
210 220 230 240 250
FSEVEELVYL RWVNACLRYE LRNYQTPAGK ISARDLSKNL SPKSQAKAKR
260 270 280 290 300
LMLEYAGSER GQGDTDLESN YSQPSSPGSD DFDNASMDSS TSRFSSFSKK
310 320 330 340 350
PGLIQKLKKW GKSKDDSSVQ SSPSRSFYGG SPGRLSSSMN KQRGPLESLM
360 370 380 390 400
IRNAGESVAI TTFGQVDQES PGTPETPNLP RIRTQQQASS PGEGLNSVAA
410 420 430 440 450
SFHVMSKSVD NVLDEKYPAY KDRHKLAVER EKHIKHKADQ ARAERFGGNV
460 470 480 490 500
ALPPKLAQLK EKRVVVPSVI TATGDQSNES NESNEGKASE NAATVTKMKL
510 520 530 540 550
VDIEKRPPRV PRPPPRSAGG GKSTNLPSAR PPLPGGGPPP PPPPPGGGPP
560 570 580 590 600
PPPGGGPPPP PPPPGALGRG AGGGNKVHRA PELVEFYQSL MKRESKKEGA
610 620 630 640 650
PSLISSGTGN SSAARNNMIG EIENRSTFLL AVKADVETQG DFVQSLATEV
660 670 680 690 700
RASSFTDIED LLAFVSWLDE ELSFLVDERA VLKHFDWPEG KADALREAAF
710 720 730 740 750
EYQDLMKLEK QVTSFVDDPN LSCEPALKKM YKLLEKVEQS VYALLRTRDM
760 770 780 790 800
AISRYKEFGI PVDWLSDTGV VGKIKLSSVQ LAKKYMKRVA YELDSVSGSD
810 820 830 840 850
KDPNREFLLL QGVRFAFRVH QFAGGFDAES MKAFEELRSR AKTESGDNNN
860
NNNNNSNEEE SVN
Length:863
Mass (Da):95,216
Last modified:June 28, 2011 - v1
Checksum:iE50B96704ADAAE29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002686 Genomic DNA. Translation: AEE77053.1.
RefSeqiNP_001189975.1. NM_001203046.1.
UniGeneiAt.27741.

Genome annotation databases

EnsemblPlantsiAT3G25690.3; AT3G25690.3; AT3G25690.
GeneIDi822157.
GrameneiAT3G25690.3; AT3G25690.3; AT3G25690.

Similar proteinsi

Entry informationi

Entry nameiF4JA42_ARATH
AccessioniPrimary (citable) accession number: F4JA42
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 5, 2017
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported