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Protein
Submitted name:

Rotamase CYP 4

Gene

ROC4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

PPIases accelerate the folding of proteins.SAAS annotation

Catalytic activityi

Peptidylproline (omega=180) = peptidylproline (omega=0).SAAS annotation

GO - Molecular functioni

  • peptidyl-prolyl cis-trans isomerase activity Source: TAIR

GO - Biological processi

  • cysteine biosynthetic process Source: TAIR
  • defense response to bacterium Source: TAIR
  • protein folding Source: InterPro
  • protein peptidyl-prolyl isomerization Source: TAIR
  • response to abscisic acid Source: TAIR
  • response to cytokinin Source: TAIR
  • response to light intensity Source: TAIR
  • response to mannitol Source: TAIR
  • response to oxidative stress Source: TAIR
  • response to salt stress Source: TAIR
  • signal transduction Source: TAIR

Keywordsi

Molecular functionIsomerase, RotamasePROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Rotamase CYP 4Imported
Gene namesi
Name:ROC4Imported
Synonyms:cyclophilin 20-3Imported, CYP20-3Imported, PEPTIDYLPROLYL ISOMERASE ROC4Imported, rotamase CYP 4Imported
Ordered Locus Names:At3g62030Imported
ORF Names:T17J13.1Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G62030
TAIRilocus:2079507 AT3G62030

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiF4IX26

Expressioni

Gene expression databases

ExpressionAtlasiF4IX26 baseline and differential

Interactioni

Protein-protein interaction databases

IntActiF4IX26, 2 interactors

Structurei

3D structure databases

ProteinModelPortaliF4IX26
SMRiF4IX26
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini151 – 308PPIase cyclophilin-typeInterPro annotationAdd BLAST158

Phylogenomic databases

eggNOGiKOG0880 Eukaryota
ENOG410Z0G4 LUCA
OrthoDBiEOG09360P2B

Family and domain databases

Gene3Di2.40.100.10, 1 hit
InterProiView protein in InterPro
IPR029000 Cyclophilin-like_dom_sf
IPR024936 Cyclophilin-type_PPIase
IPR020892 Cyclophilin-type_PPIase_CS
IPR002130 Cyclophilin-type_PPIase_dom
PANTHERiPTHR11071 PTHR11071, 1 hit
PfamiView protein in Pfam
PF00160 Pro_isomerase, 1 hit
PRINTSiPR00153 CSAPPISMRASE
SUPFAMiSSF50891 SSF50891, 1 hit
PROSITEiView protein in PROSITE
PS00170 CSA_PPIASE_1, 1 hit
PS50072 CSA_PPIASE_2, 1 hit

Sequencei

Sequence statusi: Complete.

F4IX26-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFRLLLLPYA VGAQQKLLQT PRETKVADAW NIKCQNLLLS KANQQKVFIF
60 70 80 90 100
NHSMASSSSM QMVHTSRSIA QIGFGVKSQL VSANRTTQSV CFGARSSGIA
110 120 130 140 150
LSSRLHYASP IKQFSGVYAT TKHQRTACVK SMAAEEEEVI EPQAKVTNKV
160 170 180 190 200
YFDVEIGGEV AGRIVMGLFG EVVPKTVENF RALCTGEKKY GYKGSSFHRI
210 220 230 240 250
IKDFMIQGGD FTEGNGTGGI SIYGAKFEDE NFTLKHTGPG ILSMANAGPN
260 270 280 290 300
TNGSQFFICT VKTSWLDNKH VVFGQVIEGM KLVRTLESQE TRAFDVPKKG
310
CRIYACGELP LDA
Length:313
Mass (Da):34,318
Last modified:June 28, 2011 - v1
Checksum:i5571382BA9CA7803
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002686 Genomic DNA Translation: AEE80298.1
RefSeqiNP_001154684.1, NM_001161212.1
UniGeneiAt.24742
At.48797

Genome annotation databases

EnsemblPlantsiAT3G62030.2; AT3G62030.2; AT3G62030
GeneIDi825376
GrameneiAT3G62030.2; AT3G62030.2; AT3G62030

Similar proteinsi

Entry informationi

Entry nameiF4IX26_ARATH
AccessioniPrimary (citable) accession number: F4IX26
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 25, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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