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F4ITQ2

- F4ITQ2_ARATH

UniProt

F4ITQ2 - F4ITQ2_ARATH

Protein

Glutamate receptor

Gene

GLR3.5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    Glutamate-gated receptor that probably acts as non-selective cation channel.UniRule annotation

    GO - Molecular functioni

    1. extracellular-glutamate-gated ion channel activity Source: InterPro
    2. G-protein coupled receptor activity Source: InterPro
    3. ionotropic glutamate receptor activity Source: InterPro

    Keywords - Molecular functioni

    Ion channel, Ligand-gated ion channelUniRule annotationSAAS annotation, ReceptorUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Ion transport, Transport

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate receptorUniRule annotation
    Gene namesi
    Name:GLR3.5Imported
    Ordered Locus Names:At2g32390Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 2

    Organism-specific databases

    TAIRiAT2G32390.

    Subcellular locationi

    Membrane UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Proteomic databases

    PRIDEiF4ITQ2.

    Expressioni

    Gene expression databases

    ArrayExpressiF4ITQ2.

    Structurei

    3D structure databases

    ProteinModelPortaliF4ITQ2.
    SMRiF4ITQ2. Positions 10-486, 578-726.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. [View classification]UniRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Family and domain databases

    InterProiIPR001828. ANF_lig-bd_rcpt.
    IPR000337. GPCR_3.
    IPR001320. Iontro_glu_rcpt.
    IPR017103. Iontropic_Glu_rcpt_pln.
    IPR028082. Peripla_BP_I.
    IPR001638. SBP_bac_3.
    [Graphical view]
    PfamiPF01094. ANF_receptor. 1 hit.
    PF00060. Lig_chan. 1 hit.
    PF00497. SBP_bac_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF037090. Iontro_Glu-like_rcpt_pln. 1 hit.
    PRINTSiPR00248. GPCRMGR.
    SMARTiSM00079. PBPe. 1 hit.
    [Graphical view]
    SUPFAMiSSF53822. SSF53822. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F4ITQ2-1 [UniParc]FASTAAdd to Basket

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    MGALQLMENK VVAAIGPQSS GIGHIISHVA NELHVPFLSF AATDPTLSSL    50
    QYPYFLRTTQ NDYFQMNAIT DFVSYFRWRE VVAIFVDDEY GRNGISVLGD 100
    ALAKKRAKIS YKAAFPPGAD NSSISDLLAS VNLMESRIFV VHVNPDSGLN 150
    IFSVAKSLGM MGSGYVWITT DWLLTALDSM EPLDPRALDL LQGVVAFRHY 200
    TPESDNKRQF KGRWKNLRFK ESLKSDDGFN SYALYAYDSV WLVARALDVF 250
    FSQGNTVTFS NDPSLRNTND SGIKLSKLHI FNEGERFLQV ILEMNYTGLT 300
    GQIEFNSEKN RINPAYDILN IKSTGPLRVG YWSNHTGFSV APPETLYSKP 350
    SNTSAKDQRL NEIIWPGEVI KPPRGWVFPE NGKPLKIGVP NRVSYKNYAS 400
    KDKNPLGVKG FCIDIFEAAI QLLPYPVPRT YILYGDGKKN PSYDNLISEV 450
    AANIFDVAVG DVTIITNRTK FVDFTQPFIE SGLVVVAPVK GAKSSPWSFL 500
    KPFTIEMWAV TGALFLFVGA VIWILEHRFN EEFRGPPRRQ IITVFWFSFS 550
    TMFFSHRENT VSTLGRFVLL VWLFVVLIIN SSYTASLTSI LTVQQLTSRI 600
    EGMDTLIASN EPIGVQDGTF AWKFLVNELN IAPSRIIPLK DEEEYLSALQ 650
    RGPRGGGVAA IVDELPYIKA LLSNSNCKFR TVGQEFTRTG WGFAFQRDSP 700
    LAVDMSTAIL QLAEEGKLEK IRKKWLTYDH ECTMQISDTE NYQISVQSFW 750
    GLFLICGVVW FIALTLFCWK VFWQYQRLRP EESDEVQARS EEAGSSRGKS 800
    LRAVSFKDLI KVVDKREAEI KEMLKEKSSK KLKDGQSSAE NSQSKDHETP 850
    Q 851
    Length:851
    Mass (Da):95,893
    Last modified:June 28, 2011 - v1
    Checksum:i88FD6ED5E4156E07
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002685 Genomic DNA. Translation: AEC08677.1.
    RefSeqiNP_001031464.1. NM_001036387.1.
    UniGeneiAt.13200.

    Genome annotation databases

    EnsemblPlantsiAT2G32390.2; AT2G32390.2; AT2G32390.
    GeneIDi817800.
    KEGGiath:AT2G32390.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002685 Genomic DNA. Translation: AEC08677.1 .
    RefSeqi NP_001031464.1. NM_001036387.1.
    UniGenei At.13200.

    3D structure databases

    ProteinModelPortali F4ITQ2.
    SMRi F4ITQ2. Positions 10-486, 578-726.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi F4ITQ2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT2G32390.2 ; AT2G32390.2 ; AT2G32390 .
    GeneIDi 817800.
    KEGGi ath:AT2G32390.

    Organism-specific databases

    TAIRi AT2G32390.

    Gene expression databases

    ArrayExpressi F4ITQ2.

    Family and domain databases

    InterProi IPR001828. ANF_lig-bd_rcpt.
    IPR000337. GPCR_3.
    IPR001320. Iontro_glu_rcpt.
    IPR017103. Iontropic_Glu_rcpt_pln.
    IPR028082. Peripla_BP_I.
    IPR001638. SBP_bac_3.
    [Graphical view ]
    Pfami PF01094. ANF_receptor. 1 hit.
    PF00060. Lig_chan. 1 hit.
    PF00497. SBP_bac_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF037090. Iontro_Glu-like_rcpt_pln. 1 hit.
    PRINTSi PR00248. GPCRMGR.
    SMARTi SM00079. PBPe. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53822. SSF53822. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiF4ITQ2_ARATH
    AccessioniPrimary (citable) accession number: F4ITQ2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3