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Protein
Submitted name:

AP-1 complex subunit gamma-2

Gene

At1g60070

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transportSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
AP-1 complex subunit gamma-2Imported
Gene namesi
Ordered Locus Names:At1g60070Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G60070.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

MembraneSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiF4IEP9.

Expressioni

Gene expression databases

ExpressionAtlasiF4IEP9. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G60070.2.

Structurei

3D structure databases

ProteinModelPortaliF4IEP9.
SMRiF4IEP9. Positions 9-594, 747-895.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK12391.
OMAiHALIVLM.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
2.60.40.1230. 2 hits.
InterProiIPR017107. AP1_complex_gsu.
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR002553. Clathrin/coatomer_adapt-like_N.
IPR008152. Clathrin_a/b/g-adaptin_app_Ig.
IPR008153. Clathrin_g-adaptin_app.
IPR013041. Coatomer/clathrin_app_Ig-like.
[Graphical view]
PANTHERiPTHR22780:SF5. PTHR22780:SF5. 1 hit.
PfamiPF01602. Adaptin_N. 1 hit.
PF02883. Alpha_adaptinC2. 2 hits.
[Graphical view]
PIRSFiPIRSF037094. AP1_complex_gamma. 1 hit.
SMARTiSM00809. Alpha_adaptinC2. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
SSF49348. SSF49348. 2 hits.
PROSITEiPS50180. GAE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4IEP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH
60 70 80 90 100
RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
110 120 130 140 150
EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ
160 170 180 190 200
FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
210 220 230 240 250
CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH
260 270 280 290 300
IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
310 320 330 340 350
MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH
360 370 380 390 400
RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
410 420 430 440 450
KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT
460 470 480 490 500
NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
510 520 530 540 550
EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV
560 570 580 590 600
KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
610 620 630 640 650
RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN
660 670 680 690 700
NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
710 720 730 740 750
DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV
760 770 780 790 800
AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKNN
810 820 830 840 850
SAMCLVLNVP HFYGRDSDRF MFFAKFLLVE ILGTFLQLHL DPASSNSLPA
860 870 880 890
NGNIKQTMRV TNSQKGKKPI VMRMRVGYKI NGKDVLEEGQ INNFPRGL
Length:898
Mass (Da):98,819
Last modified:June 28, 2011 - v1
Checksum:iA521A734AE1CE4A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002684 Genomic DNA. Translation: AEE33656.1.
RefSeqiNP_001185270.1. NM_001198341.1.
UniGeneiAt.24122.

Genome annotation databases

EnsemblPlantsiAT1G60070.2; AT1G60070.2; AT1G60070.
GeneIDi842301.
KEGGiath:AT1G60070.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002684 Genomic DNA. Translation: AEE33656.1.
RefSeqiNP_001185270.1. NM_001198341.1.
UniGeneiAt.24122.

3D structure databases

ProteinModelPortaliF4IEP9.
SMRiF4IEP9. Positions 9-594, 747-895.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G60070.2.

Proteomic databases

PRIDEiF4IEP9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G60070.2; AT1G60070.2; AT1G60070.
GeneIDi842301.
KEGGiath:AT1G60070.

Organism-specific databases

TAIRiAT1G60070.

Phylogenomic databases

KOiK12391.
OMAiHALIVLM.

Gene expression databases

ExpressionAtlasiF4IEP9. baseline and differential.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
2.60.40.1230. 2 hits.
InterProiIPR017107. AP1_complex_gsu.
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR002553. Clathrin/coatomer_adapt-like_N.
IPR008152. Clathrin_a/b/g-adaptin_app_Ig.
IPR008153. Clathrin_g-adaptin_app.
IPR013041. Coatomer/clathrin_app_Ig-like.
[Graphical view]
PANTHERiPTHR22780:SF5. PTHR22780:SF5. 1 hit.
PfamiPF01602. Adaptin_N. 1 hit.
PF02883. Alpha_adaptinC2. 2 hits.
[Graphical view]
PIRSFiPIRSF037094. AP1_complex_gamma. 1 hit.
SMARTiSM00809. Alpha_adaptinC2. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
SSF49348. SSF49348. 2 hits.
PROSITEiPS50180. GAE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiF4IEP9_ARATH
AccessioniPrimary (citable) accession number: F4IEP9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: June 24, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.