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F4HN54 (F4HN54_PYRSN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PNA2_1142 EMBL AEC52058.1
OrganismPyrococcus sp. (strain NA2) [Complete proteome] [HAMAP] EMBL AEC52058.1
Taxonomic identifier342949 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4HN54 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: D0D05FE5D0E6238B

FASTA37943,763
        10         20         30         40         50         60 
MVTSTFKDIL VRLGIPESRV ETLEMKGGII EDEFEGIRYL RFKDSAGKFR RGTVVFNEKT 

        70         80         90        100        110        120 
IVLGFPHIKR IVNLESGIRR TFKRGEFYVE EKVDGYNVRV VRVGDKILGI TRGGFICPFT 

       130        140        150        160        170        180 
TERITDFIPE EFFKDNPNLV LVGEMAGPES PYLVEGPPYV KEDIEFFLFD VQEINTGKSL 

       190        200        210        220        230        240 
PVEERLKIAE EYGIRHVEVF GKFTRDDIGE IREIIERLSE EGREGIVMKS PDMKKIVKYV 

       250        260        270        280        290        300 
TPFANINDIR IGAKVFYELP PGYFTSRISR LAFYIAENRI RGEEFNRIAL ELGKALLQPL 

       310        320        330        340        350        360 
VESIFDVEQE EEISEVFKVR VKRIETAYKM VTHFEKLGLK IEIVDIEEIK GGWKITFKRI 

       370 
YPDATEEIRE LIGGKAFVD 

« Hide

References

[1]"Complete genome sequence of hyperthermophilic Pyrococcus sp. strain NA2, isolated from a deep-sea hydrothermal vent area."
Lee H.S., Bae S.S., Kim M.S., Kwon K.K., Kang S.G., Lee J.H.
J. Bacteriol. 193:3666-3667(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NA2 EMBL AEC52058.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002670 Genomic DNA. Translation: AEC52058.1.
RefSeqYP_004424062.1. NC_015474.1.

3D structure databases

ProteinModelPortalF4HN54.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEC52058; AEC52058; PNA2_1142.
GeneID10554618.
KEGGpyn:PNA2_1142.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycPSP342949:GI74-1165-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4HN54_PYRSN
AccessionPrimary (citable) accession number: F4HN54
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)