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F4HHI5 (F4HHI5_MYCHM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:SRH_02965 EMBL AEC46135.1
OrganismMycoplasma hyorhinis (strain MCLD) [Complete proteome] [HAMAP] EMBL AEC46135.1
Taxonomic identifier936139 [NCBI]
Taxonomic lineageBacteriaTenericutesMollicutesMycoplasmataceaeMycoplasma

Protein attributes

Sequence length402 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding25 – 328GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding87 – 915GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding142 – 1454GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F4HHI5 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 84B31481B62B2135

FASTA40243,845
        10         20         30         40         50         60 
MAVQKPGAKK DFDRSKEHIN IGTIGHVDHG KTTLTAAIST VLSKKGLAEA KDYASIDAAP 

        70         80         90        100        110        120 
EEKARGITIN TAHIEYSTDK RHYAHVDCPG HADYIKNMIT GAAQMDGAIL VVAATDGPMP 

       130        140        150        160        170        180 
QTREHILLSK QVGVPKIVVF LNKVDMLQGE EEMVDLVEVE VRELLSSYDF DGDNTPIVRG 

       190        200        210        220        230        240 
SAKGALEGKP EWEAKILELM DAVDTYIDSP VRELDKPFLM AVEDVFTITG RGTVATGKVE 

       250        260        270        280        290        300 
RGQVKLNEEV EIVGYKAEPK KTVVTGIEMF NKNLQSAMAG DNAGVLLRGV NRDEIERGQV 

       310        320        330        340        350        360 
IAKPKTIVPH TTFKAAIYVL KKEEGGRHTP FFPNYKPQFY FRTTDVTGGV KFEQGVEMVK 

       370        380        390        400 
PGDNVNLTVE LIAPIAVEQG TKFSIREGGR TVGAGTVTEI VK 

« Hide

References

[1]"Genome analysis of a Mycoplasma hyorhinis strain derived from a primary human melanoma cell line."
Kornspan J.D., Lysnyansky I., Kahan T., Herrmann R., Rottem S., Nir-Paz R.
J. Bacteriol. 193:4543-4544(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MCLD EMBL AEC46135.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002669 Genomic DNA. Translation: AEC46135.1.
RefSeqYP_005905187.1. NC_017519.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEC46135; AEC46135; SRH_02965.
GeneID12495752.
KEGGmhm:SRH_02965.
PATRIC54238500. VBIMycHyo178314_0578.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.
OMAVTPHTEF.

Enzyme and pathway databases

BioCycMHYO936139:GLHH-574-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4HHI5_MYCHM
AccessionPrimary (citable) accession number: F4HHI5
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)