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F4H5Y3

- F4H5Y3_CELFA

UniProt

F4H5Y3 - F4H5Y3_CELFA

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Celf_2588
Organism
Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCFIM590998:GJFK-2623-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Celf_2588Imported
OrganismiCellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)Imported
Taxonomic identifieri590998 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeCellulomonadaceaeCellulomonas
ProteomesiUP000008460: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4H5Y3.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4H5Y3-1 [UniParc]FASTAAdd to Basket

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MRLPVMPPVA PMLAKSVPTI PDVGHVEPKW DGFRTIVFRD GDEVELGSRN    50
EKPMTRYFPE LVEAIRANTP ERCVLDGEIV VVTGDRLDFD ALQQRIHPAA 100
SRVRLLAGST PASFVAFDLL ALDDEDYMQR PFRDRRAALV EALADARDPV 150
FVTPATGDLA QAQDWFTRFE GAGLDGVVAK PLDGTYQPDK RTMFKIKHER 200
TADCVVAGFR WHKTGDVVGS LLLGLYDDDG DLQHVGVSAS FPMARRRTLL 250
DDLAPYRDVE LADHPWGRWA QAEAHAGNRM PGAVSRWNAK KDLSFVPLRP 300
ELVVEVAYDH MEGDRFRHTA QFRRWRTDRD PRSCTYAQLE QPVTFDLAEI 350
FGR 353
Length:353
Mass (Da):39,824
Last modified:June 28, 2011 - v1
Checksum:iA1F54DF6CDCB88E0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002666 Genomic DNA. Translation: AEE46713.1.
RefSeqiYP_004454100.1. NC_015514.1.

Genome annotation databases

EnsemblBacteriaiAEE46713; AEE46713; Celf_2588.
GeneIDi10593383.
KEGGicfi:Celf_2588.
PATRICi54616147. VBICelFim18861_2597.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002666 Genomic DNA. Translation: AEE46713.1 .
RefSeqi YP_004454100.1. NC_015514.1.

3D structure databases

ProteinModelPortali F4H5Y3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEE46713 ; AEE46713 ; Celf_2588 .
GeneIDi 10593383.
KEGGi cfi:Celf_2588.
PATRICi 54616147. VBICelFim18861_2597.

Phylogenomic databases

KOi K01971.
OMAi HERTADC.

Enzyme and pathway databases

BioCyci CFIM590998:GJFK-2623-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Cellulomonas fimi ATCC 484."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547.

Entry informationi

Entry nameiF4H5Y3_CELFA
AccessioniPrimary (citable) accession number: F4H5Y3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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