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F4H5Y3

- F4H5Y3_CELFA

UniProt

F4H5Y3 - F4H5Y3_CELFA

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Celf_2588

Organism
Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCFIM590998:GJFK-2623-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Celf_2588Imported
    OrganismiCellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)Imported
    Taxonomic identifieri590998 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeCellulomonadaceaeCellulomonas
    ProteomesiUP000008460: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF4H5Y3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiHERTADC.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F4H5Y3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRLPVMPPVA PMLAKSVPTI PDVGHVEPKW DGFRTIVFRD GDEVELGSRN    50
    EKPMTRYFPE LVEAIRANTP ERCVLDGEIV VVTGDRLDFD ALQQRIHPAA 100
    SRVRLLAGST PASFVAFDLL ALDDEDYMQR PFRDRRAALV EALADARDPV 150
    FVTPATGDLA QAQDWFTRFE GAGLDGVVAK PLDGTYQPDK RTMFKIKHER 200
    TADCVVAGFR WHKTGDVVGS LLLGLYDDDG DLQHVGVSAS FPMARRRTLL 250
    DDLAPYRDVE LADHPWGRWA QAEAHAGNRM PGAVSRWNAK KDLSFVPLRP 300
    ELVVEVAYDH MEGDRFRHTA QFRRWRTDRD PRSCTYAQLE QPVTFDLAEI 350
    FGR 353
    Length:353
    Mass (Da):39,824
    Last modified:June 28, 2011 - v1
    Checksum:iA1F54DF6CDCB88E0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002666 Genomic DNA. Translation: AEE46713.1.
    RefSeqiYP_004454100.1. NC_015514.1.

    Genome annotation databases

    EnsemblBacteriaiAEE46713; AEE46713; Celf_2588.
    GeneIDi10593383.
    KEGGicfi:Celf_2588.
    PATRICi54616147. VBICelFim18861_2597.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002666 Genomic DNA. Translation: AEE46713.1 .
    RefSeqi YP_004454100.1. NC_015514.1.

    3D structure databases

    ProteinModelPortali F4H5Y3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEE46713 ; AEE46713 ; Celf_2588 .
    GeneIDi 10593383.
    KEGGi cfi:Celf_2588.
    PATRICi 54616147. VBICelFim18861_2597.

    Phylogenomic databases

    KOi K01971.
    OMAi HERTADC.

    Enzyme and pathway databases

    BioCyci CFIM590998:GJFK-2623-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Cellulomonas fimi ATCC 484."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T.
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547Imported.

    Entry informationi

    Entry nameiF4H5Y3_CELFA
    AccessioniPrimary (citable) accession number: F4H5Y3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3