F4H5Y3 (F4H5Y3_CELFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL AEE46713.1

Gene names

Ordered Locus Names:

Celf_2588

Organism

Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) [Complete proteome] [HAMAP] EMBL AEE46713.1

Taxonomic identifier

590998 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Cellulomonadaceae › Cellulomonas › Cellulomonas fimi

Protein attributes

Sequence length	353 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEE46713.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F4H5Y3 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: A1F54DF6CDCB88E0	FASTA	353	39,824
	10 20 30 40 50 60 MRLPVMPPVA PMLAKSVPTI PDVGHVEPKW DGFRTIVFRD GDEVELGSRN EKPMTRYFPE 70 80 90 100 110 120 LVEAIRANTP ERCVLDGEIV VVTGDRLDFD ALQQRIHPAA SRVRLLAGST PASFVAFDLL 130 140 150 160 170 180 ALDDEDYMQR PFRDRRAALV EALADARDPV FVTPATGDLA QAQDWFTRFE GAGLDGVVAK 190 200 210 220 230 240 PLDGTYQPDK RTMFKIKHER TADCVVAGFR WHKTGDVVGS LLLGLYDDDG DLQHVGVSAS 250 260 270 280 290 300 FPMARRRTLL DDLAPYRDVE LADHPWGRWA QAEAHAGNRM PGAVSRWNAK KDLSFVPLRP 310 320 330 340 350 ELVVEVAYDH MEGDRFRHTA QFRRWRTDRD PRSCTYAQLE QPVTFDLAEI FGR

References

[1]

"Complete sequence of Cellulomonas fimi ATCC 484." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T. Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002666 Genomic DNA. Translation: AEE46713.1.
RefSeq	YP_004454100.1. NC_015514.1.
3D structure databases
ProteinModelPortal	F4H5Y3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEE46713; AEE46713; Celf_2588.
GeneID	10593383.
KEGG	cfi:Celf_2588.
PATRIC	54616147. VBICelFim18861_2597.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	CFIM590998:GJFK-2623-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F4H5Y3_CELFA

Accession

Primary (citable) accession number: F4H5Y3

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)