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F4H5Y3

- F4H5Y3_CELFA

UniProt

F4H5Y3 - F4H5Y3_CELFA

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Celf_2588

Organism
Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCFIM590998:GJFK-2623-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Celf_2588Imported
OrganismiCellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)Imported
Taxonomic identifieri590998 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeCellulomonadaceaeCellulomonas
ProteomesiUP000008460: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4H5Y3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4H5Y3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRLPVMPPVA PMLAKSVPTI PDVGHVEPKW DGFRTIVFRD GDEVELGSRN
60 70 80 90 100
EKPMTRYFPE LVEAIRANTP ERCVLDGEIV VVTGDRLDFD ALQQRIHPAA
110 120 130 140 150
SRVRLLAGST PASFVAFDLL ALDDEDYMQR PFRDRRAALV EALADARDPV
160 170 180 190 200
FVTPATGDLA QAQDWFTRFE GAGLDGVVAK PLDGTYQPDK RTMFKIKHER
210 220 230 240 250
TADCVVAGFR WHKTGDVVGS LLLGLYDDDG DLQHVGVSAS FPMARRRTLL
260 270 280 290 300
DDLAPYRDVE LADHPWGRWA QAEAHAGNRM PGAVSRWNAK KDLSFVPLRP
310 320 330 340 350
ELVVEVAYDH MEGDRFRHTA QFRRWRTDRD PRSCTYAQLE QPVTFDLAEI

FGR
Length:353
Mass (Da):39,824
Last modified:June 28, 2011 - v1
Checksum:iA1F54DF6CDCB88E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002666 Genomic DNA. Translation: AEE46713.1.
RefSeqiWP_013771739.1. NC_015514.1.
YP_004454100.1. NC_015514.1.

Genome annotation databases

EnsemblBacteriaiAEE46713; AEE46713; Celf_2588.
GeneIDi10593383.
KEGGicfi:Celf_2588.
PATRICi54616147. VBICelFim18861_2597.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002666 Genomic DNA. Translation: AEE46713.1 .
RefSeqi WP_013771739.1. NC_015514.1.
YP_004454100.1. NC_015514.1.

3D structure databases

ProteinModelPortali F4H5Y3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEE46713 ; AEE46713 ; Celf_2588 .
GeneIDi 10593383.
KEGGi cfi:Celf_2588.
PATRICi 54616147. VBICelFim18861_2597.

Phylogenomic databases

KOi K01971.
OMAi HERTADC.

Enzyme and pathway databases

BioCyci CFIM590998:GJFK-2623-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Cellulomonas fimi ATCC 484."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547Imported.

Entry informationi

Entry nameiF4H5Y3_CELFA
AccessioniPrimary (citable) accession number: F4H5Y3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 29, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3