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F4H5Y3 (F4H5Y3_CELFA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEE46713.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4H5Y3 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: A1F54DF6CDCB88E0

FASTA35339,824
        10         20         30         40         50         60 
MRLPVMPPVA PMLAKSVPTI PDVGHVEPKW DGFRTIVFRD GDEVELGSRN EKPMTRYFPE 

        70         80         90        100        110        120 
LVEAIRANTP ERCVLDGEIV VVTGDRLDFD ALQQRIHPAA SRVRLLAGST PASFVAFDLL 

       130        140        150        160        170        180 
ALDDEDYMQR PFRDRRAALV EALADARDPV FVTPATGDLA QAQDWFTRFE GAGLDGVVAK 

       190        200        210        220        230        240 
PLDGTYQPDK RTMFKIKHER TADCVVAGFR WHKTGDVVGS LLLGLYDDDG DLQHVGVSAS 

       250        260        270        280        290        300 
FPMARRRTLL DDLAPYRDVE LADHPWGRWA QAEAHAGNRM PGAVSRWNAK KDLSFVPLRP 

       310        320        330        340        350 
ELVVEVAYDH MEGDRFRHTA QFRRWRTDRD PRSCTYAQLE QPVTFDLAEI FGR 

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References

[1]"Complete sequence of Cellulomonas fimi ATCC 484."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Mead D., Brumm P., Woyke T.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002666 Genomic DNA. Translation: AEE46713.1.
RefSeqYP_004454100.1. NC_015514.1.

3D structure databases

ProteinModelPortalF4H5Y3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEE46713; AEE46713; Celf_2588.
GeneID10593383.
KEGGcfi:Celf_2588.
PATRIC54616147. VBICelFim18861_2597.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAERTADCV.

Enzyme and pathway databases

BioCycCFIM590998:GJFK-2623-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4H5Y3_CELFA
AccessionPrimary (citable) accession number: F4H5Y3
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)