F4GMB5 (F4GMB5_PUSST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase, catabolic EMBL AEC19020.1

Gene names

Ordered Locus Names:

PT7_0480 EMBL AEC19020.1

Organism

Pusillimonas sp. (strain T7-7) [Complete proteome] [HAMAP] EMBL AEC19020.1

Taxonomic identifier

1007105 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Pusillimonas

Protein attributes

Sequence length	376 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. SAAS SAAS020622 RuleBase RU000608
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase SAAS SAAS020622 RuleBase RU000608
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F4GMB5 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: 6BAD2B1C1F0D1321	FASTA	376	40,016
	10 20 30 40 50 60 MPRPISATVS VSSLSHNLQR VANGLQQSCN AAKPLRPRVW AVIKANAYGH GIDQAVQGFA 70 80 90 100 110 120 QADGLAMLDL NEAVRCRELG WTKPILLLEG FFEPGDIAVL DEYCLTTSLH CQEQLEMLAA 130 140 150 160 170 180 AKPANPLNAF VKLNVGMNRL GFSEYAFPDA YRQAQQLQQQ GILASVGKMS HFARADDSPV 190 200 210 220 230 240 TTTQQLQVFN RMTQGLPGPF SVCNSAASLT AGLWTTVSSD EEQWVRPGIC LYGSSPFEDR 250 260 270 280 290 300 LPDALGLRPA MTLAAQLISV REIPRGAGVG YGHVFTASDA MRIGIVACGY ADGYPRHAGT 310 320 330 340 350 360 GTPICVDGVR TRLVGRVSMD MLAVDLTPVP QAGVGSPVVL WGEGGPSVDE VAQAAGTIGY 370 ELLCAVAPRV PRVIAV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Pusillimonas sp. T7-7, a cold-tolerant diesel oil-degrading bacterium isolated from the Bohai Sea in China." Cao B., Ma T., Ren Y., Ren Y., Li G., Li P., Guo X., Ding P., Feng L. J. Bacteriol. 193:4021-4022(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T7-7 EMBL AEC19020.1.
[2]	"Genome Announcement Complete Genome Sequence of Pusillimonas sp. T7-7, a novel species isolated from the Bohai Sea, China." Cao B., Ma T., Li P., Jiang L., Li Y., Guo X., Feng L. Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: T7-7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002663 Genomic DNA. Translation: AEC19020.1.
RefSeq	YP_004415644.1. NC_015458.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEC19020; AEC19020; PT7_0480.
GeneID	10605098.
KEGG	put:PT7_0480.
PATRIC	54555223. VBIPusSp189076_0475.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
OMA	SVELWGD.
Enzyme and pathway databases
BioCyc	PSP1007105:GJAF-489-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F4GMB5_PUSST

Accession

Primary (citable) accession number: F4GMB5

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)