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F4G4Y1 (F4G4Y1_ALIDK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length316 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
   Molecular functionIsomerase RuleBase RU003886
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpseudouridine synthesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

pseudouridine synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4G4Y1 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 82193D8BC7CD48FD

FASTA31635,952
        10         20         30         40         50         60 
MHNSHDPRVL PMRDGVNPCC VVLPSQGQGL LLDFLARRLP AVSREDWLRR LHAGEVVDEW 

        70         80         90        100        110        120 
GRAATAHSPF TPGVRYYYYR ELAHEAEIPF QETVLYQDEH ILVADKPHFL PVVPAGRYLQ 

       130        140        150        160        170        180 
HTLLVRLKRR LGLRELSPVH RIDRDTAGLV LFSVQRATRG RYQALFRDRQ VRKVYEAVAP 

       190        200        210        220        230        240 
WRADLRFPRT HASRLQESGH FFRMHEVPGE PNAVTAMDVA EQAGGWARYR LEPVTGKRHQ 

       250        260        270        280        290        300 
LRVHMAALGL PLCGDGFYPE VNDPPEGDYS NPLQLLARTL SFTDPVTGQE RRFDSRLRLR 

       310 
PLADFAGPAT AGAPRA 

« Hide

References

[1]"Complete sequence of chromosome of Alicycliphilus denitrificans K601."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M. expand/collapse author list , Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14773 / CIP 107495 / K601.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002657 Genomic DNA. Translation: AEB85254.1.
RefSeqYP_004388770.1. NC_015422.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB85254; AEB85254; Alide2_2906.
GeneID10483954.
KEGGadk:Alide2_2906.
PATRIC54528508. VBIAliDen79014_2933.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK06177.

Enzyme and pathway databases

BioCycADEN596154:GHU6-2938-MONOMER.

Family and domain databases

InterProIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMSSF55120. SSF55120. 1 hit.
PROSITEPS01129. PSI_RLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4G4Y1_ALIDK
AccessionPrimary (citable) accession number: F4G4Y1
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)