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F4G4Y1

- F4G4Y1_ALIDK

UniProt

F4G4Y1 - F4G4Y1_ALIDK

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Protein

Pseudouridine synthase

Gene

Alide2_2906

Organism
Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pseudouridine synthase activity Source: InterPro
  2. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Enzyme and pathway databases

BioCyciADEN596154:GHU6-2938-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:Alide2_2906Imported
OrganismiAlicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)Imported
Taxonomic identifieri596154 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlicycliphilus
ProteomesiUP000007938: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

KOiK06177.

Family and domain databases

InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4G4Y1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MHNSHDPRVL PMRDGVNPCC VVLPSQGQGL LLDFLARRLP AVSREDWLRR
60 70 80 90 100
LHAGEVVDEW GRAATAHSPF TPGVRYYYYR ELAHEAEIPF QETVLYQDEH
110 120 130 140 150
ILVADKPHFL PVVPAGRYLQ HTLLVRLKRR LGLRELSPVH RIDRDTAGLV
160 170 180 190 200
LFSVQRATRG RYQALFRDRQ VRKVYEAVAP WRADLRFPRT HASRLQESGH
210 220 230 240 250
FFRMHEVPGE PNAVTAMDVA EQAGGWARYR LEPVTGKRHQ LRVHMAALGL
260 270 280 290 300
PLCGDGFYPE VNDPPEGDYS NPLQLLARTL SFTDPVTGQE RRFDSRLRLR
310
PLADFAGPAT AGAPRA
Length:316
Mass (Da):35,952
Last modified:June 28, 2011 - v1
Checksum:i82193D8BC7CD48FD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002657 Genomic DNA. Translation: AEB85254.1.
RefSeqiYP_004388770.1. NC_015422.1.

Genome annotation databases

EnsemblBacteriaiAEB85254; AEB85254; Alide2_2906.
GeneIDi10483954.
KEGGiadk:Alide2_2906.
PATRICi54528508. VBIAliDen79014_2933.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002657 Genomic DNA. Translation: AEB85254.1 .
RefSeqi YP_004388770.1. NC_015422.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB85254 ; AEB85254 ; Alide2_2906 .
GeneIDi 10483954.
KEGGi adk:Alide2_2906.
PATRICi 54528508. VBIAliDen79014_2933.

Phylogenomic databases

KOi K06177.

Enzyme and pathway databases

BioCyci ADEN596154:GHU6-2938-MONOMER.

Family and domain databases

InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Alicycliphilus denitrificans K601."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M.
    , Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14773 / CIP 107495 / K601Imported.

Entry informationi

Entry nameiF4G4Y1_ALIDK
AccessioniPrimary (citable) accession number: F4G4Y1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3