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F4G4Y1

- F4G4Y1_ALIDK

UniProt

F4G4Y1 - F4G4Y1_ALIDK

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Protein
Pseudouridine synthase
Gene
Alide2_2906
Organism
Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. pseudouridine synthase activity Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Enzyme and pathway databases

BioCyciADEN596154:GHU6-2938-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:Alide2_2906Imported
OrganismiAlicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)Imported
Taxonomic identifieri596154 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlicycliphilus
ProteomesiUP000007938: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

KOiK06177.

Family and domain databases

InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4G4Y1-1 [UniParc]FASTAAdd to Basket

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MHNSHDPRVL PMRDGVNPCC VVLPSQGQGL LLDFLARRLP AVSREDWLRR    50
LHAGEVVDEW GRAATAHSPF TPGVRYYYYR ELAHEAEIPF QETVLYQDEH 100
ILVADKPHFL PVVPAGRYLQ HTLLVRLKRR LGLRELSPVH RIDRDTAGLV 150
LFSVQRATRG RYQALFRDRQ VRKVYEAVAP WRADLRFPRT HASRLQESGH 200
FFRMHEVPGE PNAVTAMDVA EQAGGWARYR LEPVTGKRHQ LRVHMAALGL 250
PLCGDGFYPE VNDPPEGDYS NPLQLLARTL SFTDPVTGQE RRFDSRLRLR 300
PLADFAGPAT AGAPRA 316
Length:316
Mass (Da):35,952
Last modified:June 28, 2011 - v1
Checksum:i82193D8BC7CD48FD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002657 Genomic DNA. Translation: AEB85254.1.
RefSeqiWP_013722413.1. NC_015422.1.
YP_004388770.1. NC_015422.1.

Genome annotation databases

EnsemblBacteriaiAEB85254; AEB85254; Alide2_2906.
GeneIDi10483954.
KEGGiadk:Alide2_2906.
PATRICi54528508. VBIAliDen79014_2933.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002657 Genomic DNA. Translation: AEB85254.1 .
RefSeqi WP_013722413.1. NC_015422.1.
YP_004388770.1. NC_015422.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB85254 ; AEB85254 ; Alide2_2906 .
GeneIDi 10483954.
KEGGi adk:Alide2_2906.
PATRICi 54528508. VBIAliDen79014_2933.

Phylogenomic databases

KOi K06177.

Enzyme and pathway databases

BioCyci ADEN596154:GHU6-2938-MONOMER.

Family and domain databases

InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Alicycliphilus denitrificans K601."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M.
    , Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14773 / CIP 107495 / K601.

Entry informationi

Entry nameiF4G4Y1_ALIDK
AccessioniPrimary (citable) accession number: F4G4Y1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: September 3, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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