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Protein
Submitted name:

Cell wall hydrolase/autolysin

Gene

Alide2_4037

Organism
Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. N-acetylmuramoyl-L-alanine amidase activity Source: InterPro

GO - Biological processi

  1. peptidoglycan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciADEN596154:GHU6-4088-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cell wall hydrolase/autolysinImported
Gene namesi
Ordered Locus Names:Alide2_4037Imported
OrganismiAlicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)Imported
Taxonomic identifieri596154 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlicycliphilus
ProteomesiUP000007938 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01448.

Family and domain databases

Gene3Di3.40.630.40. 2 hits.
InterProiIPR021731. AMIN_dom.
IPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
PF11741. AMIN. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4G4E0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDAPLPHPL HTRRTLLQAG SLVLLLGRQQ IARGATIVAV RVWPAPEYSR
60 70 80 90 100
VTIESDRQLV AKQFFVPTPP RLAVDIEGLD LDPSLRELVA KVRPDDPNIA
110 120 130 140 150
GIRVGQYAPG VVRLVVDLKQ AARPQVFTLQ PVAAYQHRLV FDLYPAVPPD
160 170 180 190 200
PLEALIAERL RDAGSSAGAP QPAAPDIAKA PAPDPLDELI AQHSLKPGMP
210 220 230 240 250
TPPAPGNAPA PAAPPRTRGA APATARATDR LIIVALDPGH GGEDPGAIGP
260 270 280 290 300
GGTREKDVVL KVAHQLRDRI NATQVGGNPM RAFLTRDGDY FVPLGTRVEK
310 320 330 340 350
ARRVQADLFV SIHADAFTTP SARGASVFAL SQSGASSSAA RWLANKENEA
360 370 380 390 400
DLIGGVNVGS QDRHVQRALL DMSTTAQIND SLKLGSVLLG EIGGMARLHK
410 420 430 440 450
PRVEQAGFAV LKAPDIPSVL VETAFISNPE EEAKLRSAAY QEQLADALMR
460
GIIRYFAKNP PLARSRSV
Length:468
Mass (Da):49,870
Last modified:June 27, 2011 - v1
Checksum:i424C84660B499B63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002657 Genomic DNA. Translation: AEB86356.1.
RefSeqiWP_013517959.1. NC_015422.1.
YP_004389872.1. NC_015422.1.

Genome annotation databases

EnsemblBacteriaiAEB86356; AEB86356; Alide2_4037.
KEGGiadk:Alide2_4037.
PATRICi54530818. VBIAliDen79014_4059.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002657 Genomic DNA. Translation: AEB86356.1.
RefSeqiWP_013517959.1. NC_015422.1.
YP_004389872.1. NC_015422.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB86356; AEB86356; Alide2_4037.
KEGGiadk:Alide2_4037.
PATRICi54530818. VBIAliDen79014_4059.

Phylogenomic databases

KOiK01448.

Enzyme and pathway databases

BioCyciADEN596154:GHU6-4088-MONOMER.

Family and domain databases

Gene3Di3.40.630.40. 2 hits.
InterProiIPR021731. AMIN_dom.
IPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
PF11741. AMIN. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Alicycliphilus denitrificans K601."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M.
    , Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14773 / CIP 107495 / K601Imported.

Entry informationi

Entry nameiF4G4E0_ALIDK
AccessioniPrimary (citable) accession number: F4G4E0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2011
Last sequence update: June 27, 2011
Last modified: March 31, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.