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Protein

Glutamate decarboxylase

Gene

Lbuc_0100

Organism
Lactobacillus buchneri (strain NRRL B-30929)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciLBUC511437:GJNY-103-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Lbuc_0100Imported
OrganismiLactobacillus buchneri (strain NRRL B-30929)Imported
Taxonomic identifieri511437 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000007811 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F4FW66-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEKNDEQMI DEIGLEQNFL GSVEAGKSLP TEELPEHPMP ASIAAQLVQH
60 70 80 90 100
YRLNEAKANQ NLATFCTTQM EPEADKLMTD ALNTNAIDKS EYPKTAAMEN
110 120 130 140 150
YCVSMLAHLW GIPKGKKMYK DFIGTSTVGS SEGCMLGGLS LLLSWKHRAE
160 170 180 190 200
KAGFDTKDLH HHLPNLVIMS GYQVVWEKFC TYWNVELRQV PIDQNHMSMD
210 220 230 240 250
MDHVMDYVDE NTIGIVGIQG ITYTGAVDDI QKLDRLVSEY NKTAVLPIRI
260 270 280 290 300
HVDSAFGGLF APFVDGFKPW DFRLKNVVSI NVSGHKYGMV YPGIGWIVWR
310 320 330 340 350
NNSEDLLPKE MRFSVPYLGS SVDSIAINFS HSGAHIVGQY YNFVRFGYKG
360 370 380 390 400
YEAIMNNVRK VSLRITEELK KFGIFEILND GSQLPINCWK LADDAKVDWT
410 420 430 440 450
LYDLEGELAK YGWQVPAYPL PKNREDTTIS RIVVRPSMTM TILDDFMEDL
460 470 480
KMAIHNLNKE HGNNELEYNI PSAADATTVS NK
Length:482
Mass (Da):54,461
Last modified:June 28, 2011 - v1
Checksum:iAA44FF4B03895325
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002652 Genomic DNA. Translation: AEB72391.1.
RefSeqiWP_013726954.1. NC_015428.1.
YP_004397454.1. NC_015428.1.

Genome annotation databases

EnsemblBacteriaiAEB72391; AEB72391; Lbuc_0100.
KEGGilbh:Lbuc_0100.
PATRICi54461195. VBILacBuc105504_0162.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002652 Genomic DNA. Translation: AEB72391.1.
RefSeqiWP_013726954.1. NC_015428.1.
YP_004397454.1. NC_015428.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB72391; AEB72391; Lbuc_0100.
KEGGilbh:Lbuc_0100.
PATRICi54461195. VBILacBuc105504_0162.

Phylogenomic databases

KOiK01580.

Enzyme and pathway databases

BioCyciLBUC511437:GJNY-103-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Lactobacillus buchneri NRRL B-30929, a novel strain from a commercial ethanol plant."
    US DOE Joint Genome Institute
    Liu S., Leathers T.D., Copeland A., Chertkov O., Goodwin L., Mills D.A.
    J. Bacteriol. 193:4019-4020(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NRRL B-30929Imported.

Entry informationi

Entry nameiF4FW66_LACBN
AccessioniPrimary (citable) accession number: F4FW66
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 1, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.