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F4FW66 (F4FW66_LACBN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL AEB72391.1
Gene names
Ordered Locus Names:Lbuc_0100 EMBL AEB72391.1
OrganismLactobacillus buchneri (strain NRRL B-30929) [Complete proteome] [HAMAP] EMBL AEB72391.1
Taxonomic identifier511437 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
F4FW66 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: AA44FF4B03895325

FASTA48254,461
        10         20         30         40         50         60 
MSEKNDEQMI DEIGLEQNFL GSVEAGKSLP TEELPEHPMP ASIAAQLVQH YRLNEAKANQ 

        70         80         90        100        110        120 
NLATFCTTQM EPEADKLMTD ALNTNAIDKS EYPKTAAMEN YCVSMLAHLW GIPKGKKMYK 

       130        140        150        160        170        180 
DFIGTSTVGS SEGCMLGGLS LLLSWKHRAE KAGFDTKDLH HHLPNLVIMS GYQVVWEKFC 

       190        200        210        220        230        240 
TYWNVELRQV PIDQNHMSMD MDHVMDYVDE NTIGIVGIQG ITYTGAVDDI QKLDRLVSEY 

       250        260        270        280        290        300 
NKTAVLPIRI HVDSAFGGLF APFVDGFKPW DFRLKNVVSI NVSGHKYGMV YPGIGWIVWR 

       310        320        330        340        350        360 
NNSEDLLPKE MRFSVPYLGS SVDSIAINFS HSGAHIVGQY YNFVRFGYKG YEAIMNNVRK 

       370        380        390        400        410        420 
VSLRITEELK KFGIFEILND GSQLPINCWK LADDAKVDWT LYDLEGELAK YGWQVPAYPL 

       430        440        450        460        470        480 
PKNREDTTIS RIVVRPSMTM TILDDFMEDL KMAIHNLNKE HGNNELEYNI PSAADATTVS 


NK 

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References

[1]"Complete genome sequence of Lactobacillus buchneri NRRL B-30929, a novel strain from a commercial ethanol plant."
US DOE Joint Genome Institute
Liu S., Leathers T.D., Copeland A., Chertkov O., Goodwin L., Mills D.A.
J. Bacteriol. 193:4019-4020(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NRRL B-30929 EMBL AEB72391.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002652 Genomic DNA. Translation: AEB72391.1.
RefSeqYP_004397454.1. NC_015428.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB72391; AEB72391; Lbuc_0100.
GeneID10524212.
KEGGlbh:Lbuc_0100.
PATRIC54461195. VBILacBuc105504_0162.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycLBUC511437:GJNY-103-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4FW66_LACBN
AccessionPrimary (citable) accession number: F4FW66
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)