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F4FTX5 (F4FTX5_LACBN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length221 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 RuleBase RU000544 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124 SAAS SAAS020634

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124 SAAS SAAS020634.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding40 – 478ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding116 – 1194ATP By similarity HAMAP-Rule MF_00124

Sites

Active site1171Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1741Zinc By similarity HAMAP-Rule MF_00124
Metal binding1771Zinc By similarity HAMAP-Rule MF_00124
Metal binding2111Zinc By similarity HAMAP-Rule MF_00124
Metal binding2141Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
F4FTX5 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 1872649C9212D512

FASTA22125,829
        10         20         30         40         50         60 
MRVLANFLII IDFQNFFCIM EEKLLRKKVD ILAQLFYRYG AMNSGKTIEI IKVAHNYEEQ 

        70         80         90        100        110        120 
NKSVIIMTSA LDTREKQGMI ESRIGLERKA EPIREDTNVF DLVQELNPHA SCILIDEAQF 

       130        140        150        160        170        180 
LKKKHVMELA RIVDELNVPV MAFGLKNDFQ NNLFEGSKYL LLYADKIEEM KTICWFCGKK 

       190        200        210        220 
AIMNLRFHNG EPVYEGEQIQ MGGNESYYPV CRKHYYNPPI K 

« Hide

References

[1]"Complete genome sequence of Lactobacillus buchneri NRRL B-30929, a novel strain from a commercial ethanol plant."
US DOE Joint Genome Institute
Liu S., Leathers T.D., Copeland A., Chertkov O., Goodwin L., Mills D.A.
J. Bacteriol. 193:4019-4020(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NRRL B-30929 EMBL AEB73113.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002652 Genomic DNA. Translation: AEB73113.1.
RefSeqYP_004398176.1. NC_015428.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB73113; AEB73113; Lbuc_0854.
GeneID10525011.
KEGGlbh:Lbuc_0854.
PATRIC54462871. VBILacBuc105504_0945.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Enzyme and pathway databases

BioCycLBUC511437:GJNY-902-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4FTX5_LACBN
AccessionPrimary (citable) accession number: F4FTX5
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)