SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F4FEW8

- F4FEW8_VERMA

UniProt

F4FEW8 - F4FEW8_VERMA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: ATP-dependent DNA ligase
Gene
ligC, VAB18032_12830
Organism
Verrucosispora maris (strain AB-18-032)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciVMAR263358:GI1P-1675-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligCImported
Ordered Locus Names:VAB18032_12830Imported
OrganismiVerrucosispora maris (strain AB-18-032)Imported
Taxonomic identifieri263358 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeVerrucosispora
ProteomesiUP000008308: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4FEW8.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4FEW8-1 [UniParc]FASTAAdd to Basket

« Hide

MICLTVVGGV WLTVAVDLPI NPPVEPMLAR SVASIPTGPG MTYEPKWDGF    50
RCIIFRDGDE VELASRGGKL MTRYFPEVVE QARRQLPARC AVDGELIVIR 100
RDSPNAAPRL DFELLAQRIH PAASRVKLLA ETTPADFVAF DLLALDGESL 150
LDVPYPTRRA RLEQALAKVR PPVHVTQITT DADTARRWFD VFEGAGLDGL 200
IAKPADLPYE PGKRLMFKVK HARTADVVVA GFRWHKSGPV VGSLLLGLYD 250
DAQVLHHIGV SASFTMARRA ELLEELAPYR EVGAEHPWVH GDHERGQRIP 300
GGVSRWTGTK NLEWEPLRPE LVVEVAYDAM EGDRFRHTAR FVRWRPDRDP 350
LSCRYDQLDR PVRFDVDQVL RGDPTVTVGS GTGSA 385
Length:385
Mass (Da):42,901
Last modified:June 28, 2011 - v1
Checksum:iA94FCC9885D0EA41
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002638 Genomic DNA. Translation: AEB43680.1.
RefSeqiYP_004404280.1. NC_015434.1.

Genome annotation databases

EnsemblBacteriaiAEB43680; AEB43680; VAB18032_12830.
GeneIDi10450440.
KEGGivma:VAB18032_12830.
PATRICi54471658. VBIVerMar92278_1719.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002638 Genomic DNA. Translation: AEB43680.1 .
RefSeqi YP_004404280.1. NC_015434.1.

3D structure databases

ProteinModelPortali F4FEW8.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB43680 ; AEB43680 ; VAB18032_12830 .
GeneIDi 10450440.
KEGGi vma:VAB18032_12830.
PATRICi 54471658. VBIVerMar92278_1719.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci VMAR263358:GI1P-1675-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032."
    Roh H., Uguru G.C., Ko H.J., Kim S., Kim B.Y., Goodfellow M., Bull A.T., Kim K.H., Bibb M.J., Choi I.G., Stach J.E.
    J. Bacteriol. 193:3391-3392(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AB-18-032Imported.

Entry informationi

Entry nameiF4FEW8_VERMA
AccessioniPrimary (citable) accession number: F4FEW8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi