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F4FDY9 (F4FDY9_VERMA) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA primase, small subunit EMBL AEB43670.1
Gene names
Ordered Locus Names:VAB18032_12780 EMBL AEB43670.1
OrganismVerrucosispora maris (strain AB-18-032) [Complete proteome] [HAMAP] EMBL AEB43670.1
Taxonomic identifier263358 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Verrucosispora ›

Protein attributes

Sequence length341 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4FDY9 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: C055C06BE2D116CA

FASTA34138,089
        10         20         30         40         50         60 
MAGTKAAAEE IEVAGHTVRL SSPDRVIFPK RGFTKADVFG YYLGVGDGIM RALRERPTTL 

        70         80         90        100        110        120 
QRFPDGIEGE MFFSKRVPTR GVPPWVRTTE ITFPSGRTAA ELCPVDLAHV AWAAQMGTVV 

       130        140        150        160        170        180 
FHPWPVRAAE PDRPDELRVD LDPQPGTDFA HAATAAGELH VILDELGVPG WPKTSGGRGV 

       190        200        210        220        230        240 
HVYLRIQPRW SFVEVRRATI ALARELARRR PDLVTTAWWK EERGERVFVD YNQMARDRTI 

       250        260        270        280        290        300 
ACAYSLRANA RATVSTPVTW DELPDVDPDD FDLRTVPQRL AEQGDPHAGI DDAGWDITPL 

       310        320        330        340 
LEWAERDAAA GEGDLPYPPD HPKMPGEPKR VQPSRDRDRP R

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References

[1]"Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032."
Roh H., Uguru G.C., Ko H.J., Kim S., Kim B.Y., Goodfellow M., Bull A.T., Kim K.H., Bibb M.J., Choi I.G., Stach J.E.
J. Bacteriol. 193:3391-3392(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AB-18-032 EMBL AEB43670.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002638 Genomic DNA. Translation: AEB43670.1.
RefSeqYP_004404270.1. NC_015434.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB43670; AEB43670; VAB18032_12780.
GeneID10450430.
KEGGvma:VAB18032_12780.
PATRIC54471636. VBIVerMar92278_1708.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycVMAR263358:GI1P-1665-MONOMER.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4FDY9_VERMA
AccessionPrimary (citable) accession number: F4FDY9
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 29, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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