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Protein
Submitted name:

DNA polymerase ligd, polymerase domain protein

Gene

VAB18032_06520

Organism
Verrucosispora maris (strain AB-18-032)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciVMAR263358:GI1P-411-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase ligd, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:VAB18032_06520Imported
OrganismiVerrucosispora maris (strain AB-18-032)Imported
Taxonomic identifieri263358 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeVerrucosispora
ProteomesiUP000008308 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi263358.VAB18032_06520.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiKIFIDWS.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

F4FDR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAERFRVEV EGRTLDLSNL DKVLYPQAGF TKGEVIDYYT RIAPVLLPHL
60 70 80 90 100
ADRALTRIRY PNGVDGNSFF EKNAPAATPS WVRTENLPAP GSSKGRETID
110 120 130 140 150
YVVADDLPTL VWLANLAALE LHTPQWKVGE HPDLMVVDLD PGAPASLKQC
160 170 180 190 200
CQVALLLRDR LAADGVDAYP KTSGKKGMQL SCPIAGTQSS DDVSGYARRI
210 220 230 240 250
AQELEREHPK LIVSKMAKNL RPGKIFIDWS QNNAAKTTVA PYSLRAQPVP
260 270 280 290 300
SVSAPLTWDE VAAGAAGKRP SSRPYTAGEV LKRVDEHGDL LAPLLDLGPA

LPER
Length:304
Mass (Da):33,105
Last modified:June 28, 2011 - v1
Checksum:iC802920B6129DD16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002638 Genomic DNA. Translation: AEB42428.1.
RefSeqiWP_013731101.1. NC_015434.1.

Genome annotation databases

EnsemblBacteriaiAEB42428; AEB42428; VAB18032_06520.
KEGGivma:VAB18032_06520.
PATRICi54469066. VBIVerMar92278_0450.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002638 Genomic DNA. Translation: AEB42428.1.
RefSeqiWP_013731101.1. NC_015434.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi263358.VAB18032_06520.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB42428; AEB42428; VAB18032_06520.
KEGGivma:VAB18032_06520.
PATRICi54469066. VBIVerMar92278_0450.

Phylogenomic databases

KOiK01971.
OMAiKIFIDWS.

Enzyme and pathway databases

BioCyciVMAR263358:GI1P-411-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032."
    Roh H., Uguru G.C., Ko H.J., Kim S., Kim B.Y., Goodfellow M., Bull A.T., Kim K.H., Bibb M.J., Choi I.G., Stach J.E.
    J. Bacteriol. 193:3391-3392(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AB-18-032Imported.

Entry informationi

Entry nameiF4FDR5_VERMA
AccessioniPrimary (citable) accession number: F4FDR5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 22, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.