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F4F417

- F4F417_VERMA

UniProt

F4F417 - F4F417_VERMA

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Protein
Alpha-amylase
Gene
VAB18032_27951
Organism
Verrucosispora maris (strain AB-18-032)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVMAR263358:GI1P-4672-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:VAB18032_27951Imported
OrganismiVerrucosispora maris (strain AB-18-032)Imported
Taxonomic identifieri263358 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeVerrucosispora
ProteomesiUP000008308: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4F417-1 [UniParc]FASTAAdd to Basket

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MRVPRPRAAI PAALAATLVA ASLTVVATTT APASAAEVRA NGDAIVHLFQ    50
WRWDSIAEEC ETNLGPNGWG GVQVSPPQEH VVLPSAEGAT YPWWQDYQPV 100
SYRLDATRRG SKAQFVDMVE RCRAQGVKIY VDMVLNHMSG TGSANSGPGS 150
AGTVYSKYSY PNLFNDGSGD SYGYADFGPC YRKINNWGNK QEVQDCELLD 200
LADLNTADPE VRRKIAKYMN AVIDLGVAGF RVDAAKHVQE SHLADIINRL 250
RDVPGFGGRP DLFHEVYGDG TIPYTAYAPY GGVTNFDYQR SVSSAFRDGN 300
IAQLGNLPNY GGLTGQQAVV FIDNHDTQRE TPTLTYKNGA RYYLADTFMM 350
AHPYGRPQLM SSYAFGSVHG QGPPSASNGT TLATDCTSSA WICEHRDAGV 400
AGMPGFRNAV AGTGIASVVT DGNGRLAFAR GNRGYAAFNA TGSTWSRSFS 450
TSLPDGRYCN VGRGAYDRST GACPGGAVTV SGGSFSAAIP ADQAVALHVE 500
ARLDGPTPTA SPTVTPTASP TASPTPTASP TQPAGSTRFT ATVTTNPGQE 550
VYVVGSIPQL GSWNPANGVK LSTTSGSYPT WSGAVDVPAG TAFEWKLVKV 600
GNGVQWENDP NRTGTGGTAF TVTWNQPATN PPGEATVSFQ ATASTTYGQH 650
IYVVGDLPAL GGWDPAKGVR LSPTAYPVWT GQLSLPAGTA FSYKYVKRTD 700
SGQVVWESGT NRTATASGSV TLTDTWR 727
Length:727
Mass (Da):76,859
Last modified:June 28, 2011 - v1
Checksum:iDB96FC9437B10B56
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002638 Genomic DNA. Translation: AEB46663.1.
RefSeqiYP_004407263.1. NC_015434.1.

Genome annotation databases

EnsemblBacteriaiAEB46663; AEB46663; VAB18032_27951.
GeneIDi10453436.
KEGGivma:VAB18032_27951.
PATRICi54477734. VBIVerMar92278_4724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002638 Genomic DNA. Translation: AEB46663.1 .
RefSeqi YP_004407263.1. NC_015434.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB46663 ; AEB46663 ; VAB18032_27951 .
GeneIDi 10453436.
KEGGi vma:VAB18032_27951.
PATRICi 54477734. VBIVerMar92278_4724.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci VMAR263358:GI1P-4672-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032."
    Roh H., Uguru G.C., Ko H.J., Kim S., Kim B.Y., Goodfellow M., Bull A.T., Kim K.H., Bibb M.J., Choi I.G., Stach J.E.
    J. Bacteriol. 193:3391-3392(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AB-18-032Imported.

Entry informationi

Entry nameiF4F417_VERMA
AccessioniPrimary (citable) accession number: F4F417
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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