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F4F417

- F4F417_VERMA

UniProt

F4F417 - F4F417_VERMA

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Protein

Alpha-amylase

Gene

VAB18032_27951

Organism
Verrucosispora maris (strain AB-18-032)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVMAR263358:GI1P-4672-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:VAB18032_27951Imported
OrganismiVerrucosispora maris (strain AB-18-032)Imported
Taxonomic identifieri263358 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeVerrucosispora
ProteomesiUP000008308: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4F417-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRVPRPRAAI PAALAATLVA ASLTVVATTT APASAAEVRA NGDAIVHLFQ
60 70 80 90 100
WRWDSIAEEC ETNLGPNGWG GVQVSPPQEH VVLPSAEGAT YPWWQDYQPV
110 120 130 140 150
SYRLDATRRG SKAQFVDMVE RCRAQGVKIY VDMVLNHMSG TGSANSGPGS
160 170 180 190 200
AGTVYSKYSY PNLFNDGSGD SYGYADFGPC YRKINNWGNK QEVQDCELLD
210 220 230 240 250
LADLNTADPE VRRKIAKYMN AVIDLGVAGF RVDAAKHVQE SHLADIINRL
260 270 280 290 300
RDVPGFGGRP DLFHEVYGDG TIPYTAYAPY GGVTNFDYQR SVSSAFRDGN
310 320 330 340 350
IAQLGNLPNY GGLTGQQAVV FIDNHDTQRE TPTLTYKNGA RYYLADTFMM
360 370 380 390 400
AHPYGRPQLM SSYAFGSVHG QGPPSASNGT TLATDCTSSA WICEHRDAGV
410 420 430 440 450
AGMPGFRNAV AGTGIASVVT DGNGRLAFAR GNRGYAAFNA TGSTWSRSFS
460 470 480 490 500
TSLPDGRYCN VGRGAYDRST GACPGGAVTV SGGSFSAAIP ADQAVALHVE
510 520 530 540 550
ARLDGPTPTA SPTVTPTASP TASPTPTASP TQPAGSTRFT ATVTTNPGQE
560 570 580 590 600
VYVVGSIPQL GSWNPANGVK LSTTSGSYPT WSGAVDVPAG TAFEWKLVKV
610 620 630 640 650
GNGVQWENDP NRTGTGGTAF TVTWNQPATN PPGEATVSFQ ATASTTYGQH
660 670 680 690 700
IYVVGDLPAL GGWDPAKGVR LSPTAYPVWT GQLSLPAGTA FSYKYVKRTD
710 720
SGQVVWESGT NRTATASGSV TLTDTWR
Length:727
Mass (Da):76,859
Last modified:June 28, 2011 - v1
Checksum:iDB96FC9437B10B56
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002638 Genomic DNA. Translation: AEB46663.1.
RefSeqiYP_004407263.1. NC_015434.1.

Genome annotation databases

EnsemblBacteriaiAEB46663; AEB46663; VAB18032_27951.
GeneIDi10453436.
KEGGivma:VAB18032_27951.
PATRICi54477734. VBIVerMar92278_4724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002638 Genomic DNA. Translation: AEB46663.1 .
RefSeqi YP_004407263.1. NC_015434.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB46663 ; AEB46663 ; VAB18032_27951 .
GeneIDi 10453436.
KEGGi vma:VAB18032_27951.
PATRICi 54477734. VBIVerMar92278_4724.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci VMAR263358:GI1P-4672-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032."
    Roh H., Uguru G.C., Ko H.J., Kim S., Kim B.Y., Goodfellow M., Bull A.T., Kim K.H., Bibb M.J., Choi I.G., Stach J.E.
    J. Bacteriol. 193:3391-3392(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AB-18-032Imported.

Entry informationi

Entry nameiF4F417_VERMA
AccessioniPrimary (citable) accession number: F4F417
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 1, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3