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F4F417 (F4F417_VERMA) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VAB18032_27951 EMBL AEB46663.1
OrganismVerrucosispora maris (strain AB-18-032) [Complete proteome] [HAMAP] EMBL AEB46663.1
Taxonomic identifier263358 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeVerrucosispora

Protein attributes

Sequence length727 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F4F417 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: DB96FC9437B10B56

FASTA72776,859
        10         20         30         40         50         60 
MRVPRPRAAI PAALAATLVA ASLTVVATTT APASAAEVRA NGDAIVHLFQ WRWDSIAEEC 

        70         80         90        100        110        120 
ETNLGPNGWG GVQVSPPQEH VVLPSAEGAT YPWWQDYQPV SYRLDATRRG SKAQFVDMVE 

       130        140        150        160        170        180 
RCRAQGVKIY VDMVLNHMSG TGSANSGPGS AGTVYSKYSY PNLFNDGSGD SYGYADFGPC 

       190        200        210        220        230        240 
YRKINNWGNK QEVQDCELLD LADLNTADPE VRRKIAKYMN AVIDLGVAGF RVDAAKHVQE 

       250        260        270        280        290        300 
SHLADIINRL RDVPGFGGRP DLFHEVYGDG TIPYTAYAPY GGVTNFDYQR SVSSAFRDGN 

       310        320        330        340        350        360 
IAQLGNLPNY GGLTGQQAVV FIDNHDTQRE TPTLTYKNGA RYYLADTFMM AHPYGRPQLM 

       370        380        390        400        410        420 
SSYAFGSVHG QGPPSASNGT TLATDCTSSA WICEHRDAGV AGMPGFRNAV AGTGIASVVT 

       430        440        450        460        470        480 
DGNGRLAFAR GNRGYAAFNA TGSTWSRSFS TSLPDGRYCN VGRGAYDRST GACPGGAVTV 

       490        500        510        520        530        540 
SGGSFSAAIP ADQAVALHVE ARLDGPTPTA SPTVTPTASP TASPTPTASP TQPAGSTRFT 

       550        560        570        580        590        600 
ATVTTNPGQE VYVVGSIPQL GSWNPANGVK LSTTSGSYPT WSGAVDVPAG TAFEWKLVKV 

       610        620        630        640        650        660 
GNGVQWENDP NRTGTGGTAF TVTWNQPATN PPGEATVSFQ ATASTTYGQH IYVVGDLPAL 

       670        680        690        700        710        720 
GGWDPAKGVR LSPTAYPVWT GQLSLPAGTA FSYKYVKRTD SGQVVWESGT NRTATASGSV 


TLTDTWR 

« Hide

References

[1]"Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032."
Roh H., Uguru G.C., Ko H.J., Kim S., Kim B.Y., Goodfellow M., Bull A.T., Kim K.H., Bibb M.J., Choi I.G., Stach J.E.
J. Bacteriol. 193:3391-3392(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AB-18-032 EMBL AEB46663.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002638 Genomic DNA. Translation: AEB46663.1.
RefSeqYP_004407263.1. NC_015434.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB46663; AEB46663; VAB18032_27951.
GeneID10453436.
KEGGvma:VAB18032_27951.
PATRIC54477734. VBIVerMar92278_4724.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycVMAR263358:GI1P-4672-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view]
SUPFAMSSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4F417_VERMA
AccessionPrimary (citable) accession number: F4F417
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)