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Protein
Submitted name:

Superoxide dismutase (Exported lipoprotein)

Gene

sodC

Organism
Bacillus amyloliquefaciens LL3
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro

GO - Biological processi

  1. oxidation-reduction process Source: InterPro
  2. superoxide metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMY1001582:GL8C-2172-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase (Exported lipoprotein)Imported
Gene namesi
Name:sodCImported
ORF Names:LL3_02112Imported
OrganismiBacillus amyloliquefaciens LL3Imported
Taxonomic identifieri1001582 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000000308: Chromosome

PTM / Processingi

Keywords - PTMi

LipoproteinImported

Structurei

3D structure databases

ProteinModelPortaliF4EM28.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

F4EM28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRLLFFLML ASITLCGCGG GPAPVPSKKH GESRALEASA YREHAGLINQ
60 70 80 90 100
NGKNIGYIEV KESDDEGSDI HISAGHLPPG ASLGFHIYEK GVCQTPDFES
110 120 130 140 150
AGGPFNPLNK EHGFNNPMGH HAGDLPNLEV GADGKVDVIM NAPQTSLKEG
160 170 180 190
SRLSLLDRDG SAFIIHEHTD DYLTNPSGNS GARIACAPLK KSARRE
Length:196
Mass (Da):20,854
Last modified:June 28, 2011 - v1
Checksum:iFD764743803CEA16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002634 Genomic DNA. Translation: AEB63649.1.
RefSeqiYP_005545877.1. NC_017190.1.

Genome annotation databases

EnsemblBacteriaiAEB63649; AEB63649; LL3_02112.
GeneIDi12203142.
KEGGibql:LL3_02112.
PATRICi54316471. VBIBacAmy188832_2080.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002634 Genomic DNA. Translation: AEB63649.1.
RefSeqiYP_005545877.1. NC_017190.1.

3D structure databases

ProteinModelPortaliF4EM28.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB63649; AEB63649; LL3_02112.
GeneIDi12203142.
KEGGibql:LL3_02112.
PATRICi54316471. VBIBacAmy188832_2080.

Phylogenomic databases

KOiK04565.

Enzyme and pathway databases

BioCyciBAMY1001582:GL8C-2172-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of Bacillus amyloliquefaciens LL3, Which Exhibits Glutamic Acid-Independent Production of Poly-{gamma}-Glutamic Acid."
    Geng W., Cao M., Song C., Xie H., Liu L., Yang C., Feng J., Zhang W., Jin Y., Du Y., Wang S.
    J. Bacteriol. 193:3393-3394(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LL3Imported.

Entry informationi

Entry nameiF4EM28_BACAM
AccessioniPrimary (citable) accession number: F4EM28
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: March 4, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.