Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

F4EIX8 (F4EIX8_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Isocitrate dehydrogenase [NADP] RuleBase RU004446

EC=1.1.1.42 RuleBase RU004446
Gene names
Name:icd EMBL AEB64532.1
ORF Names:LL3_03001 EMBL AEB64532.1
OrganismBacillus amyloliquefaciens LL3 [Complete proteome] EMBL AEB64532.1
Taxonomic identifier1001582 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length423 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH. RuleBase RU004446

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. RuleBase RU004446

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Sequences

Sequence LengthMass (Da)Tools
F4EIX8 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 39F4AAA75CAA3C4C

FASTA42346,506
        10         20         30         40         50         60 
MSQGEKITVS NGVLNVPNNP IIPFIEGDGT GPDIWNAASK VLEAAVEKAY KGEKKITWKE 

        70         80         90        100        110        120 
VYAGEKAYNK TGEWLPAQTL EDIREYFIAI KGPLTTPVGG GIRSLNVALR QELDLFTCLR 

       130        140        150        160        170        180 
PVRYFTGVPS PVKRPEDTDM VIFRENTEDI YAGIEYAKGS EEVEKLISFL QNEMGVNKIR 

       190        200        210        220        230        240 
FPETSGIGIK PVSEEGTSRL VRAAIEYAIE NGRKSVTLVH KGNIMKFTEG AFKNWGYELA 

       250        260        270        280        290        300 
EREYGDKVFT WAEYDRIVEK DGKEAADKAQ SEAEAAGKII VKDSIADIFL QQILTRPSEF 

       310        320        330        340        350        360 
DVVATMNLNG DYISDALAAQ VGGIGIAPGA NINYETGHAI FEATHGTAPK YAGLDKVNPS 

       370        380        390        400        410        420 
SVILSGVLLL EHLNWNEAAD LIIKSMEKTI ASKVVTYDFA RLMDGATEVK CSEFGEELIK 


NMD 

« Hide

References

[1]"Complete Genome Sequence of Bacillus amyloliquefaciens LL3, Which Exhibits Glutamic Acid-Independent Production of Poly-{gamma}-Glutamic Acid."
Geng W., Cao M., Song C., Xie H., Liu L., Yang C., Feng J., Zhang W., Jin Y., Du Y., Wang S.
J. Bacteriol. 193:3393-3394(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: LL3 EMBL AEB64532.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002634 Genomic DNA. Translation: AEB64532.1.
RefSeqYP_005546760.1. NC_017190.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB64532; AEB64532; LL3_03001.
GeneID12202087.
KEGGbql:LL3_03001.
PATRIC54318218. VBIBacAmy188832_2943.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Enzyme and pathway databases

BioCycBAMY1001582:GL8C-3065-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR004439. Isocitrate_DH_NADP_dimer_prok.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsTIGR00183. prok_nadp_idh. 1 hit.
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4EIX8_BACAM
AccessionPrimary (citable) accession number: F4EIX8
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)