Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Superoxide dismutase ( lipoprotein)

Gene

sodC

Organism
Bacillus amyloliquefaciens TA208
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro

GO - Biological processi

  1. oxidation-reduction process Source: InterPro
  2. superoxide metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBAMY999891:GL8G-1526-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase ( lipoprotein)Imported
Gene namesi
Name:sodCImported
ORF Names:BAMTA208_07460Imported
OrganismiBacillus amyloliquefaciens TA208Imported
Taxonomic identifieri999891 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000008307: Chromosome

PTM / Processingi

Keywords - PTMi

LipoproteinImported

Structurei

3D structure databases

ProteinModelPortaliF4E6Y7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

F4E6Y7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRLLFFLML ASITLCGCGG GPAPVPSKKH GESRALEASA YREHAGLINQ
60 70 80 90 100
NGKNIGYIEV KESDDEGSDI HISAGHLPPG ASLGFHIYEK GVCQTPDFES
110 120 130 140 150
AGGPFNPLNK EHGFNNPMGH HAGDLPNLEV GADGKVDVIM NAPQTSLKEG
160 170 180 190
SRLSLLDRDG SAFIIHEHTD DYLTNPSGNS GARIACAPLK KSARRE
Length:196
Mass (Da):20,854
Last modified:June 28, 2011 - v1
Checksum:iFD764743803CEA16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002627 Genomic DNA. Translation: AEB23665.1.
RefSeqiYP_005541158.1. NC_017188.1.

Genome annotation databases

EnsemblBacteriaiAEB23665; AEB23665; BAMTA208_07460.
GeneIDi12131608.
KEGGibaz:BAMTA208_07460.
PATRICi54306682. VBIBacAmy189468_1473.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002627 Genomic DNA. Translation: AEB23665.1.
RefSeqiYP_005541158.1. NC_017188.1.

3D structure databases

ProteinModelPortaliF4E6Y7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB23665; AEB23665; BAMTA208_07460.
GeneIDi12131608.
KEGGibaz:BAMTA208_07460.
PATRICi54306682. VBIBacAmy189468_1473.

Phylogenomic databases

KOiK04565.

Enzyme and pathway databases

BioCyciBAMY999891:GL8G-1526-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Bacillus amyloliquefaciens TA208, a strain for industrial production of guanosine and ribavirin."
    Zhang G., Deng A., Xu Q., Liang Y., Chen N., Wen T.
    J. Bacteriol. 193:3142-3143(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TA208Imported.

Entry informationi

Entry nameiF4E6Y7_BACAM
AccessioniPrimary (citable) accession number: F4E6Y7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.