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F4E3Z4 (F4E3Z4_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP-dependent DNA ligase EMBL AEB23490.1
EC=6.5.1.1 EMBL AEB23490.1
Gene names
Name:ligB EMBL AEB23490.1
ORF Names:BAMTA208_06575 EMBL AEB23490.1
OrganismBacillus amyloliquefaciens TA208 EMBL AEB23490.1
Taxonomic identifier999891 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length270 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEB23490.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4E3Z4 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 64194E837D765B5A

FASTA27031,044
        10         20         30         40         50         60 
MFVSPMLLHS IKEPFDDDDY ITELKFDGIR LILSKFNDQI KLYTRHNNEV TSKFPELLDL 

        70         80         90        100        110        120 
DIPNGTVLDG EIIVATPGGA PDFEAVMERF MSKKSAHKVV YCVFDVVYID GHSIANKPLT 

       130        140        150        160        170        180 
ERKSMLSDLN LDHDNVFVIE GLQGNGLAYF NLAKEKNLEG IVLKKANSPY EINKRSHSWL 

       190        200        210        220        230        240 
KVINYDYTDV LITGYTKEDI KFLLSYPDGT TAGFMEFMPN AERSKFHSMK QVKSESDEYV 

       250        260        270 
FVEPILCKVK HRFKTKHGKL RIPSFESWRV

« Hide

References

[1]"Complete Genome Sequence of Bacillus amyloliquefaciens TA208, a Strain for Industrial Production of Guanosine and Ribavirin."
Zhang G., Deng A., Xu Q., Liang Y., Chen N., Wen T.
J. Bacteriol. 193:3142-3143(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: TA208 EMBL AEB23490.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002627 Genomic DNA. Translation: AEB23490.1.
RefSeqYP_005540983.1. NC_017188.1.

3D structure databases

ProteinModelPortalF4E3Z4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB23490; AEB23490; BAMTA208_06575.
GeneID12131433.
KEGGbaz:BAMTA208_06575.
PATRIC54306347. VBIBacAmy189468_1306.

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4E3Z4_BACAM
AccessionPrimary (citable) accession number: F4E3Z4
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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