F4DWM8 (F4DWM8_PSEMN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase EMBL AEB59980.1

Gene names

Ordered Locus Names:

MDS_3949 EMBL AEB59980.1

Organism

Pseudomonas mendocina (strain NK-01) [Complete proteome] [HAMAP]

Taxonomic identifier

1001585 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas aeruginosa group › Pseudomonas mendocina

Protein attributes

Sequence length	715 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F4DWM8 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: 7A4A832C4BEF2661	FASTA	715	79,802
	10 20 30 40 50 60 MAQAQSKIAA VPAKQILLVV DDRMENLEAM QALLEDGEWQ LRCASSGEEA LRCLLEEDVG 70 80 90 100 110 120 LVLLDVQMPG MDGFEVARLM RGNPRTRLTP IIFVSAIAQT HDAVLRGYSS GAVDFVLKPF 130 140 150 160 170 180 DPSVLRHKIH SLLEHEHNRC ELQALSQQLE RARAFNASVL ANAAEGILVV GEDGRIQFAN 190 200 210 220 230 240 PAMAQMLDGE VGDLEGVELL SFLKNPASER GWLESEFYLH FKREATYRVH EAMMRTFKGG 250 260 270 280 290 300 CLPVALSCSP LPLQQRAMVV IALDMSVVRN LHAQLESQAV TDSLTGLLNR RGFHQALESA 310 320 330 340 350 360 LARIERSGQR VAVLYLDLDG FKRINDSLGH DVGDQLLRRV GEQLKACLRP YDSLARIGGD 370 380 390 400 410 420 EFTALLDNLG HPEDAAKVAE KLIELVSVRH TLDGVDFTLG ASVGIACFPE CGQSVEGLLR 430 440 450 460 470 480 SADMAMYEAK RAGRQQYRFF SPEMNGRARS RLMLEESLRH AIENDDFVLV YQPQFQLESG 490 500 510 520 530 540 RLRGFEALLR WQHRVAGTVA PNVFIPLLEE TRLINRLGEW IFREGARQLA DFKQQFGEDM 550 560 570 580 590 600 VLSLNVSPVQ FGMPQLVTDL QRVLDAHGLK PSQLEVEVTE SALMQDLELT QAQLRHLREL 610 620 630 640 650 660 GVKIAIDDFG TGYSSLAYLR HFELDTLKID RLFISNMLDS PRDAAVVSTI IDLGRHLGLE 670 680 690 700 710 VIAEGVETQE QRKWLTRHNC NIMQGFLVAP GIPAGSAMQV PAQLDWNRLP LPRDE

References

[1]

"Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides." Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., Song D., Yang X., Wang S. J. Bacteriol. 193:3413-3414(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NK-01 EMBL AEB59980.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002620 Genomic DNA. Translation: AEB59980.1.
RefSeq	YP_004381732.1. NC_015410.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEB59980; AEB59980; MDS_3949.
GeneID	10458731.
KEGG	pmk:MDS_3949.
PATRIC	54488712. VBIPseMen187712_4017.
Organism-specific databases
CMR	Search...
Enzyme and pathway databases
BioCyc	PMEN1001585:GIWS-4009-MONOMER.
Family and domain databases
Gene3D	3.20.20.450. 1 hit.
InterPro	IPR001054. A/G_cyclase. IPR011006. CheY-like_superfamily. IPR001633. Diguanylate_PEstase_EAL_dom. IPR000160. GGDEF_dom. IPR000014. PAS. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF13188. PAS_8. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. SM00091. PAS. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF52172. CheY_like. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F4DWM8_PSEMN

Accession

Primary (citable) accession number: F4DWM8

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)