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F4DTF2

- F4DTF2_PSEMN

UniProt

F4DTF2 - F4DTF2_PSEMN

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Pseudomonas mendocina (strain NK-01)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei140 – 1401UniRule annotation
    Active sitei545 – 5451UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotation

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciPMEN1001585:GIWS-3739-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:MDS_3687Imported
    OrganismiPseudomonas mendocina (strain NK-01)Imported
    Taxonomic identifieri1001585 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000008306: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    KOiK01595.
    OMAiIDIVAQK.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F4DTF2-1 [UniParc]FASTAAdd to Basket

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    MAEIDARLRE EVHLLGELLG HTISTQLGDE FLDKIERIRK AAKAGRSGSD    50
    AGAEQLTSTL GDLGDDELLP VARAFNQFLN LANIAEQQHR VRRRRAGEPE 100
    PFELRVLDEL LERLLAEGQG GDELARQLGR LDIELVLTAH PTEVARRTLI 150
    QKYDAIAAQL TALDHSDLSR GERERIVERL QRLIAEAWHT EEIRRSRPSP 200
    VDEAKWGFAV IEHSLWQAVP QFLRRADQSL QAATGLRLPL EAAPIRFASW 250
    MGGDRDGNPN VTARVTREVL LLARWMAADL YLRDVDHLAA ELSMQQASDE 300
    LRAQVGDSAE PYRALLKQLR ERLRETRSWA QQALTADIAA GPSVLQDNRD 350
    LLAPLQLCYQ SLHQCGMGVI ADGPLLDCLR RAATFGLFLV RLDVRQDSAR 400
    HAAALSEITD YLGLGRYGEW DEEARLSFLQ RELDSRRPLL PSDYRPSADT 450
    AEVLATCREV AAAPAASLGS YVISMAGAAS DVLAVQLLLK EAGLRRPMRV 500
    VPLFETLADL DHAGPVMDRL LGLPGYRARL HGPQEVMIGY SDSAKDAGTT 550
    AAAWAQYRAQ EELVRLCREH QVELLLFHGR GGTVGRGGGP AHAAILSQPP 600
    GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPAPEP 650
    SWRAMMDRLA DVGVKAYRGV VREHPQFVEY FRQATPEQEL GRLPLGSRPA 700
    KRREGGVESL RAIPWIFAWT QTRLMLPAWL GWEQALGQAL AGGDAELLKD 750
    MRERWPFFRT RIDMLEMVLT KADASIAALY DERLVESTLQ PLGAQLRDLL 800
    SQACAAVLEL TGQSCLLAHN PETLESISVR NTYLDPLHLL QAELLARCRQ 850
    REQAPESPLE QALLVSVAGI AAGLRNTG 878
    Length:878
    Mass (Da):97,270
    Last modified:June 28, 2011 - v1
    Checksum:i78B1133066FC781A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002620 Genomic DNA. Translation: AEB59718.1.
    RefSeqiWP_013716777.1. NC_015410.1.
    YP_004381470.1. NC_015410.1.

    Genome annotation databases

    EnsemblBacteriaiAEB59718; AEB59718; MDS_3687.
    GeneIDi10458469.
    KEGGipmk:MDS_3687.
    PATRICi54488162. VBIPseMen187712_3752.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002620 Genomic DNA. Translation: AEB59718.1 .
    RefSeqi WP_013716777.1. NC_015410.1.
    YP_004381470.1. NC_015410.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEB59718 ; AEB59718 ; MDS_3687 .
    GeneIDi 10458469.
    KEGGi pmk:MDS_3687.
    PATRICi 54488162. VBIPseMen187712_3752.

    Phylogenomic databases

    KOi K01595.
    OMAi IDIVAQK.

    Enzyme and pathway databases

    BioCyci PMEN1001585:GIWS-3739-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides."
      Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., Song D., Yang X., Wang S.
      J. Bacteriol. 193:3413-3414(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NK-01Imported.

    Entry informationi

    Entry nameiF4DTF2_PSEMN
    AccessioniPrimary (citable) accession number: F4DTF2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3