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F4DTF2

- F4DTF2_PSEMN

UniProt

F4DTF2 - F4DTF2_PSEMN

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, MDS_3687
Organism
Pseudomonas mendocina (strain NK-01)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotationSAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei140 – 1401 By similarityUniRule annotation
Active sitei545 – 5451 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotations

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciPMEN1001585:GIWS-3739-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:MDS_3687Imported
OrganismiPseudomonas mendocina (strain NK-01)Imported
Taxonomic identifieri1001585 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008306: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.
OMAiIDIVAQK.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4DTF2-1 [UniParc]FASTAAdd to Basket

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MAEIDARLRE EVHLLGELLG HTISTQLGDE FLDKIERIRK AAKAGRSGSD    50
AGAEQLTSTL GDLGDDELLP VARAFNQFLN LANIAEQQHR VRRRRAGEPE 100
PFELRVLDEL LERLLAEGQG GDELARQLGR LDIELVLTAH PTEVARRTLI 150
QKYDAIAAQL TALDHSDLSR GERERIVERL QRLIAEAWHT EEIRRSRPSP 200
VDEAKWGFAV IEHSLWQAVP QFLRRADQSL QAATGLRLPL EAAPIRFASW 250
MGGDRDGNPN VTARVTREVL LLARWMAADL YLRDVDHLAA ELSMQQASDE 300
LRAQVGDSAE PYRALLKQLR ERLRETRSWA QQALTADIAA GPSVLQDNRD 350
LLAPLQLCYQ SLHQCGMGVI ADGPLLDCLR RAATFGLFLV RLDVRQDSAR 400
HAAALSEITD YLGLGRYGEW DEEARLSFLQ RELDSRRPLL PSDYRPSADT 450
AEVLATCREV AAAPAASLGS YVISMAGAAS DVLAVQLLLK EAGLRRPMRV 500
VPLFETLADL DHAGPVMDRL LGLPGYRARL HGPQEVMIGY SDSAKDAGTT 550
AAAWAQYRAQ EELVRLCREH QVELLLFHGR GGTVGRGGGP AHAAILSQPP 600
GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPAPEP 650
SWRAMMDRLA DVGVKAYRGV VREHPQFVEY FRQATPEQEL GRLPLGSRPA 700
KRREGGVESL RAIPWIFAWT QTRLMLPAWL GWEQALGQAL AGGDAELLKD 750
MRERWPFFRT RIDMLEMVLT KADASIAALY DERLVESTLQ PLGAQLRDLL 800
SQACAAVLEL TGQSCLLAHN PETLESISVR NTYLDPLHLL QAELLARCRQ 850
REQAPESPLE QALLVSVAGI AAGLRNTG 878
Length:878
Mass (Da):97,270
Last modified:June 28, 2011 - v1
Checksum:i78B1133066FC781A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002620 Genomic DNA. Translation: AEB59718.1.
RefSeqiWP_013716777.1. NC_015410.1.
YP_004381470.1. NC_015410.1.

Genome annotation databases

EnsemblBacteriaiAEB59718; AEB59718; MDS_3687.
GeneIDi10458469.
KEGGipmk:MDS_3687.
PATRICi54488162. VBIPseMen187712_3752.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002620 Genomic DNA. Translation: AEB59718.1 .
RefSeqi WP_013716777.1. NC_015410.1.
YP_004381470.1. NC_015410.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB59718 ; AEB59718 ; MDS_3687 .
GeneIDi 10458469.
KEGGi pmk:MDS_3687.
PATRICi 54488162. VBIPseMen187712_3752.

Phylogenomic databases

KOi K01595.
OMAi IDIVAQK.

Enzyme and pathway databases

BioCyci PMEN1001585:GIWS-3739-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides."
    Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., Song D., Yang X., Wang S.
    J. Bacteriol. 193:3413-3414(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NK-01Imported.

Entry informationi

Entry nameiF4DTF2_PSEMN
AccessioniPrimary (citable) accession number: F4DTF2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: September 3, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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