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F4DTF2

- F4DTF2_PSEMN

UniProt

F4DTF2 - F4DTF2_PSEMN

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Pseudomonas mendocina (strain NK-01)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Note: Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei140 – 1401UniRule annotation
Active sitei545 – 5451UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciPMEN1001585:GIWS-3739-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:MDS_3687Imported
OrganismiPseudomonas mendocina (strain NK-01)Imported
Taxonomic identifieri1001585 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008306: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.
OMAiIDIVAQK.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4DTF2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAEIDARLRE EVHLLGELLG HTISTQLGDE FLDKIERIRK AAKAGRSGSD
60 70 80 90 100
AGAEQLTSTL GDLGDDELLP VARAFNQFLN LANIAEQQHR VRRRRAGEPE
110 120 130 140 150
PFELRVLDEL LERLLAEGQG GDELARQLGR LDIELVLTAH PTEVARRTLI
160 170 180 190 200
QKYDAIAAQL TALDHSDLSR GERERIVERL QRLIAEAWHT EEIRRSRPSP
210 220 230 240 250
VDEAKWGFAV IEHSLWQAVP QFLRRADQSL QAATGLRLPL EAAPIRFASW
260 270 280 290 300
MGGDRDGNPN VTARVTREVL LLARWMAADL YLRDVDHLAA ELSMQQASDE
310 320 330 340 350
LRAQVGDSAE PYRALLKQLR ERLRETRSWA QQALTADIAA GPSVLQDNRD
360 370 380 390 400
LLAPLQLCYQ SLHQCGMGVI ADGPLLDCLR RAATFGLFLV RLDVRQDSAR
410 420 430 440 450
HAAALSEITD YLGLGRYGEW DEEARLSFLQ RELDSRRPLL PSDYRPSADT
460 470 480 490 500
AEVLATCREV AAAPAASLGS YVISMAGAAS DVLAVQLLLK EAGLRRPMRV
510 520 530 540 550
VPLFETLADL DHAGPVMDRL LGLPGYRARL HGPQEVMIGY SDSAKDAGTT
560 570 580 590 600
AAAWAQYRAQ EELVRLCREH QVELLLFHGR GGTVGRGGGP AHAAILSQPP
610 620 630 640 650
GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPAPEP
660 670 680 690 700
SWRAMMDRLA DVGVKAYRGV VREHPQFVEY FRQATPEQEL GRLPLGSRPA
710 720 730 740 750
KRREGGVESL RAIPWIFAWT QTRLMLPAWL GWEQALGQAL AGGDAELLKD
760 770 780 790 800
MRERWPFFRT RIDMLEMVLT KADASIAALY DERLVESTLQ PLGAQLRDLL
810 820 830 840 850
SQACAAVLEL TGQSCLLAHN PETLESISVR NTYLDPLHLL QAELLARCRQ
860 870
REQAPESPLE QALLVSVAGI AAGLRNTG
Length:878
Mass (Da):97,270
Last modified:June 28, 2011 - v1
Checksum:i78B1133066FC781A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002620 Genomic DNA. Translation: AEB59718.1.
RefSeqiWP_013716777.1. NC_015410.1.
YP_004381470.1. NC_015410.1.

Genome annotation databases

EnsemblBacteriaiAEB59718; AEB59718; MDS_3687.
GeneIDi10458469.
KEGGipmk:MDS_3687.
PATRICi54488162. VBIPseMen187712_3752.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002620 Genomic DNA. Translation: AEB59718.1 .
RefSeqi WP_013716777.1. NC_015410.1.
YP_004381470.1. NC_015410.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEB59718 ; AEB59718 ; MDS_3687 .
GeneIDi 10458469.
KEGGi pmk:MDS_3687.
PATRICi 54488162. VBIPseMen187712_3752.

Phylogenomic databases

KOi K01595.
OMAi IDIVAQK.

Enzyme and pathway databases

BioCyci PMEN1001585:GIWS-3739-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides."
    Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., Song D., Yang X., Wang S.
    J. Bacteriol. 193:3413-3414(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NK-01Imported.

Entry informationi

Entry nameiF4DTF2_PSEMN
AccessioniPrimary (citable) accession number: F4DTF2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: November 26, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3