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F4DS73 (F4DS73_PSEMN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MDS_2241 EMBL AEB58272.1
OrganismPseudomonas mendocina (strain NK-01) [Complete proteome] [HAMAP] EMBL AEB58272.1
Taxonomic identifier1001585 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length403 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL AEB58272.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4DS73 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 08E1D4AADF09558D

FASTA40344,800
        10         20         30         40         50         60 
MQVSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP EEILQDVIRN 

        70         80         90        100        110        120 
LPTAQGYSDS KGLFSARKAV MQYYQQKQVE GVTIEDIYLG NGVSELIVMA MQALLNNGDE 

       130        140        150        160        170        180 
VLIPAPDYPL WTAAVALSGG KPVHYLCDEQ AGWFPDIADM RAKITPNTKA LVLINPNNPT 

       190        200        210        220        230        240 
GAVYSKEVLQ DIVELARQHN LVIFSDEIYD KILYDEAVHI STASLAPDVL CLTFNGLSKS 

       250        260        270        280        290        300 
YRVAGFRSGW VAISGPKHKA QSYIEGLDIL ANMRLCANVP SQHAIQTALG GYQSINDLVL 

       310        320        330        340        350        360 
PNGRLLEQRN RAWELLNDIP GVSCVKPMGA LYAFPKIDPK VCPIHNDEKF VLDLLLSEKL 

       370        380        390        400 
LIVQGTAFNW PWPDHFRVVT LPRVDDLEQA IGRIGNFLKT YRQ 

« Hide

References

[1]"Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides."
Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., Song D., Yang X., Wang S.
J. Bacteriol. 193:3413-3414(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NK-01 EMBL AEB58272.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002620 Genomic DNA. Translation: AEB58272.1.
RefSeqYP_004380024.1. NC_015410.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB58272; AEB58272; MDS_2241.
GeneID10457023.
KEGGpmk:MDS_2241.
PATRIC54485140. VBIPseMen187712_2280.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK14260.
OMAYQARDMR.

Enzyme and pathway databases

BioCycPMEN1001585:GIWS-2269-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4DS73_PSEMN
AccessionPrimary (citable) accession number: F4DS73
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 14, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)