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Protein
Submitted name:

Aminotransferase AlaT

Gene

MDS_2241

Organism
Pseudomonas mendocina (strain NK-01)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciPMEN1001585:GIWS-2269-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aminotransferase AlaTImported
Gene namesi
Ordered Locus Names:MDS_2241Imported
OrganismiPseudomonas mendocina (strain NK-01)Imported
Taxonomic identifieri1001585 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008306 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK14260.
OMAiQRNRTWE.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

F4DS73-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP
60 70 80 90 100
EEILQDVIRN LPTAQGYSDS KGLFSARKAV MQYYQQKQVE GVTIEDIYLG
110 120 130 140 150
NGVSELIVMA MQALLNNGDE VLIPAPDYPL WTAAVALSGG KPVHYLCDEQ
160 170 180 190 200
AGWFPDIADM RAKITPNTKA LVLINPNNPT GAVYSKEVLQ DIVELARQHN
210 220 230 240 250
LVIFSDEIYD KILYDEAVHI STASLAPDVL CLTFNGLSKS YRVAGFRSGW
260 270 280 290 300
VAISGPKHKA QSYIEGLDIL ANMRLCANVP SQHAIQTALG GYQSINDLVL
310 320 330 340 350
PNGRLLEQRN RAWELLNDIP GVSCVKPMGA LYAFPKIDPK VCPIHNDEKF
360 370 380 390 400
VLDLLLSEKL LIVQGTAFNW PWPDHFRVVT LPRVDDLEQA IGRIGNFLKT

YRQ
Length:403
Mass (Da):44,800
Last modified:June 28, 2011 - v1
Checksum:i08E1D4AADF09558D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002620 Genomic DNA. Translation: AEB58272.1.
RefSeqiWP_013715364.1. NC_015410.1.
YP_004380024.1. NC_015410.1.

Genome annotation databases

EnsemblBacteriaiAEB58272; AEB58272; MDS_2241.
KEGGipmk:MDS_2241.
PATRICi54485140. VBIPseMen187712_2280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002620 Genomic DNA. Translation: AEB58272.1.
RefSeqiWP_013715364.1. NC_015410.1.
YP_004380024.1. NC_015410.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB58272; AEB58272; MDS_2241.
KEGGipmk:MDS_2241.
PATRICi54485140. VBIPseMen187712_2280.

Phylogenomic databases

KOiK14260.
OMAiQRNRTWE.

Enzyme and pathway databases

BioCyciPMEN1001585:GIWS-2269-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides."
    Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., Song D., Yang X., Wang S.
    J. Bacteriol. 193:3413-3414(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NK-01Imported.

Entry informationi

Entry nameiF4DS73_PSEMN
AccessioniPrimary (citable) accession number: F4DS73
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 29, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.