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F4DLY3 (F4DLY3_PSEMN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MDS_1820 EMBL AEB57851.1
OrganismPseudomonas mendocina (strain NK-01) [Complete proteome] [HAMAP] EMBL AEB57851.1
Taxonomic identifier1001585 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length456 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F4DLY3 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: EBD82AA170F444A8

FASTA45648,059
        10         20         30         40         50         60 
MSFNIGLSGL RAATSDLNVT GNNIANAGTA GFKQSRAEFA DLYASSMLGT GKNPQGSGVL 

        70         80         90        100        110        120 
LADVAQLFNQ GNINYTQNAL DMAINGNGFF MTSNNGEMSY TRSGYFGTDR DGYIVNNFGY 

       130        140        150        160        170        180 
RLQGYAADDS GNILPVQSDL RVSAGQQEPK ATTTVTQRIN LNSNAVRPAN AGTMAAPTFD 

       190        200        210        220        230        240 
PSDSKSFNWS TSTNIYDSQG NAHVMSQYFV KNEAPANNGW VMHVLIDGVN PRDPSSTQPF 

       250        260        270        280        290        300 
SYAVNYDAAG QLADPALTPL ASTPPNPALD APAIPTGTPN GIFALAEADW VPAEKDPVNP 

       310        320        330        340        350        360 
GTMVANGADS EAFTFDMRGS TQYAASFGVN AVSQDGYTTG QLAGIEVDDT GIIFARYTNG 

       370        380        390        400        410        420 
QSKVQGQVLL ANFANVQGLS PVGKTAWVQS FESGEPVIGT PRSSTLGALQ AGALEDSNVE 

       430        440        450 
LSDQLVNLIV AQRNYQANAK TIETESAITQ TIINLR 

« Hide

References

[1]"Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides."
Guo W., Wang Y., Song C., Yang C., Li Q., Li B., Su W., Sun X., Song D., Yang X., Wang S.
J. Bacteriol. 193:3413-3414(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NK-01 EMBL AEB57851.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002620 Genomic DNA. Translation: AEB57851.1.
RefSeqYP_004379603.1. NC_015410.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB57851; AEB57851; MDS_1820.
GeneID10456602.
KEGGpmk:MDS_1820.
PATRIC54484254. VBIPseMen187712_1848.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02390.
OMAGANPNEW.

Enzyme and pathway databases

BioCycPMEN1001585:GIWS-1838-MONOMER.

Family and domain databases

InterProIPR011491. Falgellar_basal_body_FlaE.
IPR001444. Flag_bb_rod_N.
IPR020013. Flagellar_FlgE/F/G.
IPR010930. Flg_bb/hook_C_dom.
[Graphical view]
PfamPF07559. FlaE. 1 hit.
PF00460. Flg_bb_rod. 1 hit.
PF06429. Flg_bbr_C. 1 hit.
[Graphical view]
TIGRFAMsTIGR03506. FlgEFG_subfam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4DLY3_PSEMN
AccessionPrimary (citable) accession number: F4DLY3
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: June 11, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)