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F4D9U1 (F4D9U1_AERVB) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
Ordered Locus Names:B565_1911 EMBL AEB49946.1
OrganismAeromonas veronii (strain B565) [Complete proteome] [HAMAP] EMBL AEB49946.1
Taxonomic identifier998088 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4D9U1 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 7F1E824C4F50D9D5

FASTA47553,074
        10         20         30         40         50         60 
MKHTAGIWAI AGMLIAPLAH ADVILHAFNW KYSEVTAKAD LIKSAGYKQV LISPPLKSSG 

        70         80         90        100        110        120 
NEWWARYQPQ DLRLVDSPLG NKQDLDQLIT AMKARGIAVY VDVVLNHMAN ESWKRSDLNY 

       130        140        150        160        170        180 
PGNELLQSYA SNPAYFERQK LFGDLGQNFL SGQDFHPKGC ISDWNNPGHV QYWRLCGGAG 

       190        200        210        220        230        240 
DKGLPDLDPN NWVVSQQQTY LKALKGMGIK GFRVDAVKHM SDYQINAVFT PEIKQGMHVF 

       250        260        270        280        290        300 
GEVITTGGAG STDYERFLKP YLDSSGQGAY DFPLFASLRG ALGYGGSMNL LADPGAYGQA 

       310        320        330        340        350        360 
LPGSRAVTFA VTHDIPTNDG FRYQILSQTD EKLAYAYLLG RDGGSPLVYS DHGETQAKDG 

       370        380        390        400        410        420 
LRWQDYYQRA DLKGMIRFHN AVQGQPMQLV GSGDCFVLFK RGKQGLVGIN KCDYEQEYWL 

       430        440        450        460        470 
DTARFEMNWY RNYRDVLDQG AVVNVQSQWV RVAIPARSAR MWLQECSSRK ISGES 

« Hide

References

[1]"Complete genome sequence of Aeromonas veronii strain B565."
Li Y., Liu Y., Zhou Z., Huang H., Ren Y., Zhang Y., Li G., Zhou Z., Wang L.
J. Bacteriol. 193:3389-3390(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B565 EMBL AEB49946.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002607 Genomic DNA. Translation: AEB49946.1.
RefSeqYP_004392563.1. NC_015424.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEB49946; AEB49946; B565_1911.
GeneID10487828.
KEGGavr:B565_1911.
PATRIC54536533. VBIAerVer186715_1931.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycAVER998088:GHKF-1981-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4D9U1_AERVB
AccessionPrimary (citable) accession number: F4D9U1
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 9, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)