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Protein

Alpha-amylase

Gene

B565_1911

Organism
Aeromonas veronii (strain B565)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciAVER998088:GHKF-1981-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:B565_1911Imported
OrganismiAeromonas veronii (strain B565)Imported
Taxonomic identifieri998088 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
ProteomesiUP000000312 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.
OMAiDLDPNNW.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F4D9U1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKHTAGIWAI AGMLIAPLAH ADVILHAFNW KYSEVTAKAD LIKSAGYKQV
60 70 80 90 100
LISPPLKSSG NEWWARYQPQ DLRLVDSPLG NKQDLDQLIT AMKARGIAVY
110 120 130 140 150
VDVVLNHMAN ESWKRSDLNY PGNELLQSYA SNPAYFERQK LFGDLGQNFL
160 170 180 190 200
SGQDFHPKGC ISDWNNPGHV QYWRLCGGAG DKGLPDLDPN NWVVSQQQTY
210 220 230 240 250
LKALKGMGIK GFRVDAVKHM SDYQINAVFT PEIKQGMHVF GEVITTGGAG
260 270 280 290 300
STDYERFLKP YLDSSGQGAY DFPLFASLRG ALGYGGSMNL LADPGAYGQA
310 320 330 340 350
LPGSRAVTFA VTHDIPTNDG FRYQILSQTD EKLAYAYLLG RDGGSPLVYS
360 370 380 390 400
DHGETQAKDG LRWQDYYQRA DLKGMIRFHN AVQGQPMQLV GSGDCFVLFK
410 420 430 440 450
RGKQGLVGIN KCDYEQEYWL DTARFEMNWY RNYRDVLDQG AVVNVQSQWV
460 470
RVAIPARSAR MWLQECSSRK ISGES
Length:475
Mass (Da):53,074
Last modified:June 28, 2011 - v1
Checksum:i7F1E824C4F50D9D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002607 Genomic DNA. Translation: AEB49946.1.
RefSeqiWP_005352116.1. NC_015424.1.
YP_004392563.1. NC_015424.1.

Genome annotation databases

EnsemblBacteriaiAEB49946; AEB49946; B565_1911.
KEGGiavr:B565_1911.
PATRICi54536533. VBIAerVer186715_1931.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002607 Genomic DNA. Translation: AEB49946.1.
RefSeqiWP_005352116.1. NC_015424.1.
YP_004392563.1. NC_015424.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEB49946; AEB49946; B565_1911.
KEGGiavr:B565_1911.
PATRICi54536533. VBIAerVer186715_1931.

Phylogenomic databases

KOiK01176.
OMAiDLDPNNW.

Enzyme and pathway databases

BioCyciAVER998088:GHKF-1981-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Aeromonas veronii strain B565."
    Li Y., Liu Y., Zhou Z., Huang H., Ren Y., Zhang Y., Li G., Zhou Z., Wang L.
    J. Bacteriol. 193:3389-3390(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B565Imported.

Entry informationi

Entry nameiF4D9U1_AERVB
AccessioniPrimary (citable) accession number: F4D9U1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 29, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.