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F4D177

- F4D177_PSEUX

UniProt

F4D177 - F4D177_PSEUX

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Psed_4718

Organism
Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPDIO675635:GHMF-4761-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Psed_4718Imported
OrganismiPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)Imported
Taxonomic identifieri675635 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaePseudonocardia
ProteomesiUP000007809: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4D177.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4D177-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDLPVMPPVK PMLAKPVAAI PDGRHYEPKW DGFRSIIFRD GDEVEIGSRN
60 70 80 90 100
ERPMTRYFPE VVEAVKANFP ERAVIDGEIV VVDRERNRLD FEALQQRIHP
110 120 130 140 150
ADSRVRLLAE QTPASFVAFD LLALGDDDLT GSRLDERRAT LERVLGDAKP
160 170 180 190 200
PVHITPATQD PVLAEQWFRE FEGAGLDGLI AKPLDLTYQP DKRVMAKIKH
210 220 230 240 250
ERTCDCVVAG YRVHKSGPDA IGSLLLGLFD ERGVLASVGV VGAFPMARRR
260 270 280 290 300
ALFTELQPLV TEFEGHPWNW AAHELGERTP RKNEGSRWNA GKDLSFVPLR
310 320 330 340 350
PERVVEVRYD YMEGLRFRHT AQFVRWRDDR TPESCTYEQL EQPVSFDLGD

VLGLPD
Length:356
Mass (Da):40,374
Last modified:June 28, 2011 - v1
Checksum:iCE0D9A5FE410899A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002593 Genomic DNA. Translation: AEA26865.1.
RefSeqiWP_013676777.1. NC_015312.1.
YP_004334718.1. NC_015312.1.

Genome annotation databases

EnsemblBacteriaiAEA26865; AEA26865; Psed_4718.
GeneIDi10366562.
KEGGipdx:Psed_4718.
PATRICi54401043. VBIPseDio141225_4790.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002593 Genomic DNA. Translation: AEA26865.1 .
RefSeqi WP_013676777.1. NC_015312.1.
YP_004334718.1. NC_015312.1.

3D structure databases

ProteinModelPortali F4D177.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEA26865 ; AEA26865 ; Psed_4718 .
GeneIDi 10366562.
KEGGi pdx:Psed_4718.
PATRICi 54401043. VBIPseDio141225_4790.

Phylogenomic databases

KOi K01971.
OMAi HERTADC.

Enzyme and pathway databases

BioCyci PDIO675635:GHMF-4761-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190Imported.

Entry informationi

Entry nameiF4D177_PSEUX
AccessioniPrimary (citable) accession number: F4D177
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 29, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3