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F4D176 (F4D176_PSEUX) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Uracil-DNA glycosylase superfamily EMBL AEA26864.1
Gene names
Ordered Locus Names:Psed_4717 EMBL AEA26864.1
OrganismPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) [Complete proteome] [HAMAP]
Taxonomic identifier675635 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Pseudonocardia ›

Protein attributes

Sequence length195 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing N-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4D176 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 5C54D80237DAA12D

FASTA19520,834
        10         20         30         40         50         60 
MASRFSAAEL AAARDRTIDD VLPAPGDPPL RVLFCGINPG LVSAATGHHF ARPGNRFWPV 

        70         80         90        100        110        120 
LHDAGFTPRL LRPAEQDELR GLGLGITNMV ARTTARADEL ADDELRAGGE RLRELVAAER 

       130        140        150        160        170        180 
PRWLAVVGVT AYRVAFAAPR AAVGPQERTL GDTGIWVLPN PSGLNAHWSR AAMAEEFARL 

       190 
REAAEAAQAS GDAQA

« Hide

References

[1]"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190."
Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L.
J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002593 Genomic DNA. Translation: AEA26864.1.
RefSeqYP_004334717.1. NC_015312.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA26864; AEA26864; Psed_4717.
GeneID10366561.
KEGGpdx:Psed_4717.
PATRIC54401041. VBIPseDio141225_4789.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03649.

Enzyme and pathway databases

BioCycPDIO675635:GHMF-5075-MONOMER.

Family and domain databases

Gene3D3.40.470.10. 1 hit.
InterProIPR015637. DNA_glycosylase_G/T-mismatch.
IPR005122. Uracil-DNA_glycosylase-like.
[Graphical view]
PANTHERPTHR12159. PTHR12159. 1 hit.
PfamPF03167. UDG. 1 hit.
[Graphical view]
SMARTSM00986. UDG. 1 hit.
[Graphical view]
SUPFAMSSF52141. UDNA_glycsylseSF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4D176_PSEUX
AccessionPrimary (citable) accession number: F4D176
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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