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F4CY12 (F4CY12_PSEUX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
F4CY12 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: B82E7EF67D7501DF

FASTA47351,723
        10         20         30         40         50         60 
MPIAQPPSET GGHRSDVPVN PIFAREPISI PRFALPDQGL DPEIAYQVVH DELMLDGNAR 

        70         80         90        100        110        120 
LNLATFVTTW AEPHAERLMT ESFDKNVIDK DEYPRTADLE ARCVRMLATL WNAPDPEHAV 

       130        140        150        160        170        180 
GCSTTGSSEA CMLGGLALKR RWQIARRAAG RPTDRPNIVM GVNVQICWDK FANFFEVEPR 

       190        200        210        220        230        240 
LVPMDGDRLH LGAAEAVAQC DENTIGVAVI LGSTFDGSYE PVAEVCAALD DLQERTGIDI 

       250        260        270        280        290        300 
PVHVDGASGA MVAPFCDPDL EWDFRLDRVA SINTSGHKYG LVYPGVGWAL WRDAAALPEE 

       310        320        330        340        350        360 
LVFRVNYLGG DMPTFALNFS RPGGQVIAQY YNFLRLGMDG YRRVQQTCRD VARSLSSRIA 

       370        380        390        400        410        420 
EFDRLSLLTD GSELPVFAFT VDAEAPFSAF DLSAALREAG WLVPAYTFPA NREDLAALRI 

       430        440        450        460        470 
VVRNGFSHDL AGLLLDDLGR ALARLEKQPS PQRGAESSSF AHGAGAPAGS HQR 

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References

[1]"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190."
Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L.
J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002593 Genomic DNA. Translation: AEA24253.1.
RefSeqYP_004332106.1. NC_015312.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA24253; AEA24253; Psed_2026.
GeneID10363857.
KEGGpdx:Psed_2026.
PATRIC54395499. VBIPseDio141225_2037.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.
OMAAQYYTFL.

Enzyme and pathway databases

BioCycPDIO675635:GHMF-2056-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4CY12_PSEUX
AccessionPrimary (citable) accession number: F4CY12
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)