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Protein

Glutamate decarboxylase

Gene

Psed_2026

Organism
Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPDIO675635:GHMF-2056-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Psed_2026Imported
OrganismiPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)Imported
Taxonomic identifieri675635 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaePseudonocardia
ProteomesiUP000007809 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi675635.Psed_2026.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiKPASHII.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F4CY12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPIAQPPSET GGHRSDVPVN PIFAREPISI PRFALPDQGL DPEIAYQVVH
60 70 80 90 100
DELMLDGNAR LNLATFVTTW AEPHAERLMT ESFDKNVIDK DEYPRTADLE
110 120 130 140 150
ARCVRMLATL WNAPDPEHAV GCSTTGSSEA CMLGGLALKR RWQIARRAAG
160 170 180 190 200
RPTDRPNIVM GVNVQICWDK FANFFEVEPR LVPMDGDRLH LGAAEAVAQC
210 220 230 240 250
DENTIGVAVI LGSTFDGSYE PVAEVCAALD DLQERTGIDI PVHVDGASGA
260 270 280 290 300
MVAPFCDPDL EWDFRLDRVA SINTSGHKYG LVYPGVGWAL WRDAAALPEE
310 320 330 340 350
LVFRVNYLGG DMPTFALNFS RPGGQVIAQY YNFLRLGMDG YRRVQQTCRD
360 370 380 390 400
VARSLSSRIA EFDRLSLLTD GSELPVFAFT VDAEAPFSAF DLSAALREAG
410 420 430 440 450
WLVPAYTFPA NREDLAALRI VVRNGFSHDL AGLLLDDLGR ALARLEKQPS
460 470
PQRGAESSSF AHGAGAPAGS HQR
Length:473
Mass (Da):51,723
Last modified:June 28, 2011 - v1
Checksum:iB82E7EF67D7501DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002593 Genomic DNA. Translation: AEA24253.1.
RefSeqiWP_013674184.1. NC_015312.1.

Genome annotation databases

EnsemblBacteriaiAEA24253; AEA24253; Psed_2026.
KEGGipdx:Psed_2026.
PATRICi54395499. VBIPseDio141225_2037.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002593 Genomic DNA. Translation: AEA24253.1.
RefSeqiWP_013674184.1. NC_015312.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi675635.Psed_2026.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEA24253; AEA24253; Psed_2026.
KEGGipdx:Psed_2026.
PATRICi54395499. VBIPseDio141225_2037.

Phylogenomic databases

KOiK01580.
OMAiKPASHII.

Enzyme and pathway databases

BioCyciPDIO675635:GHMF-2056-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190Imported.

Entry informationi

Entry nameiF4CY12_PSEUX
AccessioniPrimary (citable) accession number: F4CY12
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: July 22, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.