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Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Psed_4328

Organism
Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi470 – 489H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Psed_4328Imported
OrganismiPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)Imported
Taxonomic identifieri675635 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaePseudonocardia
Proteomesi
  • UP000007809 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi675635.Psed_4328.

Structurei

3D structure databases

ProteinModelPortaliF4CXB4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini446 – 511HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4105DHT. Bacteria.
COG2206. LUCA.
COG2771. LUCA.
OMAiEHIYAKT.
OrthoDBiPOG091H09F9.

Family and domain databases

CDDicd00077. HDc. 1 hit.
cd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR003607. HD/PDEase_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F4CXB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAAPGRVRL AELVATISLG TDLGLGQPME HVIRQTIIAL RLADLLDLPE
60 70 80 90 100
PERVVVYYSG LLAWVGCHTD AYEQAKWFGD DIAMKREAMF SGDGAADLAR
110 120 130 140 150
LLVRRLGSGG SVPDRVRTTV TFPVVGLRWF SSILESHWKA TDLLAEQLGL
160 170 180 190 200
GDDVRRSLVE SYERWDGRGA AGLRGEQIRL ASRLVYLADV VAAFERLGGA
210 220 230 240 250
DAAVRMARER AGGQFDPDLV DLLCAHCRDV LAGLDQESHW AQILDREPGL
260 270 280 290 300
ARTLGEAELD DALAAIGDFA DLKSPYFIGH ARTVAQLAGD AAAGLGLVPD
310 320 330 340 350
EATRVRRAAL VHDLGRLGVS NGIWDKRSPL TLAEQERIRT HPYLTERMLA
360 370 380 390 400
FSPRLAELGA IAVLHHERLD GTGYPRGLSG GAIPVTGRIL AAADRYATAT
410 420 430 440 450
EERPHRPATD PDAAATGLRD DVRRGALDAD AVEAVLSAAG HRVRRRRAWP
460 470 480 490 500
AGLTTREVEV LRLLARGLSN RDIAGRLVLS PKTVGAHVEH IYAKTGANNR
510 520
ATAGLFAMRH GLMSDFEPAE RS
Length:522
Mass (Da):56,499
Last modified:June 28, 2011 - v1
Checksum:i740AF4D8E65A7BDF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002593 Genomic DNA. Translation: AEA26488.1.
RefSeqiWP_013676402.1. NC_015312.1.

Genome annotation databases

EnsemblBacteriaiAEA26488; AEA26488; Psed_4328.
KEGGipdx:Psed_4328.

Similar proteinsi

Entry informationi

Entry nameiF4CXB4_PSEUX
AccessioniPrimary (citable) accession number: F4CXB4
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: September 27, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported