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F4CXB4 (F4CXB4_PSEUX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length522 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
F4CXB4 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 740AF4D8E65A7BDF

FASTA52256,499
        10         20         30         40         50         60 
MTAAPGRVRL AELVATISLG TDLGLGQPME HVIRQTIIAL RLADLLDLPE PERVVVYYSG 

        70         80         90        100        110        120 
LLAWVGCHTD AYEQAKWFGD DIAMKREAMF SGDGAADLAR LLVRRLGSGG SVPDRVRTTV 

       130        140        150        160        170        180 
TFPVVGLRWF SSILESHWKA TDLLAEQLGL GDDVRRSLVE SYERWDGRGA AGLRGEQIRL 

       190        200        210        220        230        240 
ASRLVYLADV VAAFERLGGA DAAVRMARER AGGQFDPDLV DLLCAHCRDV LAGLDQESHW 

       250        260        270        280        290        300 
AQILDREPGL ARTLGEAELD DALAAIGDFA DLKSPYFIGH ARTVAQLAGD AAAGLGLVPD 

       310        320        330        340        350        360 
EATRVRRAAL VHDLGRLGVS NGIWDKRSPL TLAEQERIRT HPYLTERMLA FSPRLAELGA 

       370        380        390        400        410        420 
IAVLHHERLD GTGYPRGLSG GAIPVTGRIL AAADRYATAT EERPHRPATD PDAAATGLRD 

       430        440        450        460        470        480 
DVRRGALDAD AVEAVLSAAG HRVRRRRAWP AGLTTREVEV LRLLARGLSN RDIAGRLVLS 

       490        500        510        520 
PKTVGAHVEH IYAKTGANNR ATAGLFAMRH GLMSDFEPAE RS 

« Hide

References

[1]"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190."
Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L.
J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002593 Genomic DNA. Translation: AEA26488.1.
RefSeqYP_004334341.1. NC_015312.1.

3D structure databases

ProteinModelPortalF4CXB4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA26488; AEA26488; Psed_4328.
GeneID10366170.
KEGGpdx:Psed_4328.
PATRIC54400249. VBIPseDio141225_4396.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAQERIRTH.

Enzyme and pathway databases

BioCycPDIO675635:GHMF-4369-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4CXB4_PSEUX
AccessionPrimary (citable) accession number: F4CXB4
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: May 14, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)