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F4CXB4

- F4CXB4_PSEUX

UniProt

F4CXB4 - F4CXB4_PSEUX

Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Psed_4328

Organism
Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. metal ion binding Source: InterPro
    3. phosphoric diester hydrolase activity Source: InterPro
    4. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciPDIO675635:GHMF-4369-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator, LuxR familyImported
    Gene namesi
    Ordered Locus Names:Psed_4328Imported
    OrganismiPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)Imported
    Taxonomic identifieri675635 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaePseudonocardia
    ProteomesiUP000007809: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF4CXB4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

    Phylogenomic databases

    OMAiQERIRTH.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProiIPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00196. GerE. 1 hit.
    [Graphical view]
    PRINTSiPR00038. HTHLUXR.
    SMARTiSM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view]
    SUPFAMiSSF46894. SSF46894. 1 hit.
    PROSITEiPS00622. HTH_LUXR_1. 1 hit.
    PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F4CXB4-1 [UniParc]FASTAAdd to Basket

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    MTAAPGRVRL AELVATISLG TDLGLGQPME HVIRQTIIAL RLADLLDLPE    50
    PERVVVYYSG LLAWVGCHTD AYEQAKWFGD DIAMKREAMF SGDGAADLAR 100
    LLVRRLGSGG SVPDRVRTTV TFPVVGLRWF SSILESHWKA TDLLAEQLGL 150
    GDDVRRSLVE SYERWDGRGA AGLRGEQIRL ASRLVYLADV VAAFERLGGA 200
    DAAVRMARER AGGQFDPDLV DLLCAHCRDV LAGLDQESHW AQILDREPGL 250
    ARTLGEAELD DALAAIGDFA DLKSPYFIGH ARTVAQLAGD AAAGLGLVPD 300
    EATRVRRAAL VHDLGRLGVS NGIWDKRSPL TLAEQERIRT HPYLTERMLA 350
    FSPRLAELGA IAVLHHERLD GTGYPRGLSG GAIPVTGRIL AAADRYATAT 400
    EERPHRPATD PDAAATGLRD DVRRGALDAD AVEAVLSAAG HRVRRRRAWP 450
    AGLTTREVEV LRLLARGLSN RDIAGRLVLS PKTVGAHVEH IYAKTGANNR 500
    ATAGLFAMRH GLMSDFEPAE RS 522
    Length:522
    Mass (Da):56,499
    Last modified:June 28, 2011 - v1
    Checksum:i740AF4D8E65A7BDF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002593 Genomic DNA. Translation: AEA26488.1.
    RefSeqiWP_013676402.1. NC_015312.1.
    YP_004334341.1. NC_015312.1.

    Genome annotation databases

    EnsemblBacteriaiAEA26488; AEA26488; Psed_4328.
    GeneIDi10366170.
    KEGGipdx:Psed_4328.
    PATRICi54400249. VBIPseDio141225_4396.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002593 Genomic DNA. Translation: AEA26488.1 .
    RefSeqi WP_013676402.1. NC_015312.1.
    YP_004334341.1. NC_015312.1.

    3D structure databases

    ProteinModelPortali F4CXB4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA26488 ; AEA26488 ; Psed_4328 .
    GeneIDi 10366170.
    KEGGi pdx:Psed_4328.
    PATRICi 54400249. VBIPseDio141225_4396.

    Phylogenomic databases

    OMAi QERIRTH.

    Enzyme and pathway databases

    BioCyci PDIO675635:GHMF-4369-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProi IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00196. GerE. 1 hit.
    [Graphical view ]
    PRINTSi PR00038. HTHLUXR.
    SMARTi SM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46894. SSF46894. 1 hit.
    PROSITEi PS00622. HTH_LUXR_1. 1 hit.
    PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190Imported.

    Entry informationi

    Entry nameiF4CXB4_PSEUX
    AccessioniPrimary (citable) accession number: F4CXB4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3