F4CVX7 (F4CVX7_PSEUX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, polymerase domain protein EMBL AEA25462.1

Gene names

Ordered Locus Names:

Psed_3272 EMBL AEA25462.1

Organism

Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) [Complete proteome] [HAMAP]

Taxonomic identifier

675635 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Pseudonocardia › Pseudonocardia dioxanivorans

Protein attributes

Sequence length	661 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	F4CVX7 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: BAB6CF917C62CF46	FASTA	661	72,328
	10 20 30 40 50 60 MFAFGSPSHK ALSLTLVPLE EYRRKRDRSR TPEPVPDTDP AADGSDHDGG RFVVQEHHAS 70 80 90 100 110 120 ALHWDVRLER DGVLVSWAVP KGLPVDTETV RLAVRTEDHP MEYLDFSGEI PAGEYGAGTM 130 140 150 160 170 180 TIWDAGTYRT EKWSAREVAV VLQGQRARGR FVFVRSDRER RDGWILRRSD PGTARDPLPR 190 200 210 220 230 240 DTLPMLATPG PLPLGDGWWL QVGFGGERVV VRVDGGRARF TDADGAELEV PALRAFGPTV 250 260 270 280 290 300 GATPLLLDAE LVGNPRRDAV LWIGDLLHLD GRDTLDVPFA DRLALLEGLE LVGPAWRPAP 310 320 330 340 350 360 AYRDAGQAVV DAAAEQGLPF VVAKRGDSPY RPGRRSDDWI EVATTAPAPA ARRDRPATAA 370 380 390 400 410 420 RPGRRDGVGR ARLTNPDKVL YPLTGTTKAQ VLGHYLAVAE VMLPHLRDRP VTMVRWPDGV 430 440 450 460 470 480 EKPSFFEKDV SRHAPGWIRT ARVGTPGGRS ESADFPLLDD AEGLAWAANL AALELHVPQW 490 500 510 520 530 540 RVGPRGGRGL PDLVVFDLDP GEGANVVDCC RVAERIADLL AADGLSAHPR TSGSKGLQLY 550 560 570 580 590 600 VPVTVSRAER TAEYARDIAA TVAGESPRTV TDVMAKARRR GKVFVDWSQN NPAKTTIASY 610 620 630 640 650 660 SLRGRPRPTV ATPVTWDEVR ACRTVDDLVF TLDDLPGRIA EHGDLMAPLL FTERPRLPRR G

References

[1]

"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190." Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L. J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002593 Genomic DNA. Translation: AEA25462.1.
RefSeq	YP_004333315.1. NC_015312.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA25462; AEA25462; Psed_3272.
GeneID	10365109.
KEGG	pdx:Psed_3272.
PATRIC	54398083. VBIPseDio141225_3321.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	PDIO675635:GHMF-3623-MONOMER.
Family and domain databases
InterPro	IPR014144. LigD_PE_domain. IPR014145. LigD_pol. [Graphical view]
Pfam	PF13298. LigD_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F4CVX7_PSEUX

Accession

Primary (citable) accession number: F4CVX7

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)