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F4CVX7

- F4CVX7_PSEUX

UniProt

F4CVX7 - F4CVX7_PSEUX

Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Psed_3272

Organism
Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciPDIO675635:GHMF-3308-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, polymerase domain proteinImported
    Gene namesi
    Ordered Locus Names:Psed_3272Imported
    OrganismiPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)Imported
    Taxonomic identifieri675635 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaePseudonocardia
    ProteomesiUP000007809: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiMAIEVED.

    Family and domain databases

    InterProiIPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF13298. LigD_N. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F4CVX7-1 [UniParc]FASTAAdd to Basket

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    MFAFGSPSHK ALSLTLVPLE EYRRKRDRSR TPEPVPDTDP AADGSDHDGG    50
    RFVVQEHHAS ALHWDVRLER DGVLVSWAVP KGLPVDTETV RLAVRTEDHP 100
    MEYLDFSGEI PAGEYGAGTM TIWDAGTYRT EKWSAREVAV VLQGQRARGR 150
    FVFVRSDRER RDGWILRRSD PGTARDPLPR DTLPMLATPG PLPLGDGWWL 200
    QVGFGGERVV VRVDGGRARF TDADGAELEV PALRAFGPTV GATPLLLDAE 250
    LVGNPRRDAV LWIGDLLHLD GRDTLDVPFA DRLALLEGLE LVGPAWRPAP 300
    AYRDAGQAVV DAAAEQGLPF VVAKRGDSPY RPGRRSDDWI EVATTAPAPA 350
    ARRDRPATAA RPGRRDGVGR ARLTNPDKVL YPLTGTTKAQ VLGHYLAVAE 400
    VMLPHLRDRP VTMVRWPDGV EKPSFFEKDV SRHAPGWIRT ARVGTPGGRS 450
    ESADFPLLDD AEGLAWAANL AALELHVPQW RVGPRGGRGL PDLVVFDLDP 500
    GEGANVVDCC RVAERIADLL AADGLSAHPR TSGSKGLQLY VPVTVSRAER 550
    TAEYARDIAA TVAGESPRTV TDVMAKARRR GKVFVDWSQN NPAKTTIASY 600
    SLRGRPRPTV ATPVTWDEVR ACRTVDDLVF TLDDLPGRIA EHGDLMAPLL 650
    FTERPRLPRR G 661
    Length:661
    Mass (Da):72,328
    Last modified:June 28, 2011 - v1
    Checksum:iBAB6CF917C62CF46
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002593 Genomic DNA. Translation: AEA25462.1.
    RefSeqiWP_013675383.1. NC_015312.1.
    YP_004333315.1. NC_015312.1.

    Genome annotation databases

    EnsemblBacteriaiAEA25462; AEA25462; Psed_3272.
    GeneIDi10365109.
    KEGGipdx:Psed_3272.
    PATRICi54398083. VBIPseDio141225_3321.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002593 Genomic DNA. Translation: AEA25462.1 .
    RefSeqi WP_013675383.1. NC_015312.1.
    YP_004333315.1. NC_015312.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA25462 ; AEA25462 ; Psed_3272 .
    GeneIDi 10365109.
    KEGGi pdx:Psed_3272.
    PATRICi 54398083. VBIPseDio141225_3321.

    Phylogenomic databases

    KOi K01971.
    OMAi MAIEVED.

    Enzyme and pathway databases

    BioCyci PDIO675635:GHMF-3308-MONOMER.

    Family and domain databases

    InterProi IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF13298. LigD_N. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190Imported.

    Entry informationi

    Entry nameiF4CVX7_PSEUX
    AccessioniPrimary (citable) accession number: F4CVX7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3