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F4CPI4 (F4CPI4_PSEUX) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Psed_2901 EMBL AEA25101.1
OrganismPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) [Complete proteome] [HAMAP] EMBL AEA25101.1
Taxonomic identifier675635 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaePseudonocardia

Protein attributes

Sequence length346 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4CPI4 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 27A28819F576E381

FASTA34638,128
        10         20         30         40         50         60 
MAAKTVVQLT VPGPEGDREV RLSSPDKVYF PARGITKRQV VEYYLAVSEP MTRVLLNRPT 

        70         80         90        100        110        120 
NLKRFPDGVD GEPFFAKRLP KGAPPWVRTA TVTFPSGRKA DTLAPSEPAV IAWAANLGTL 

       130        140        150        160        170        180 
DFHPWPVRAA DTDRPDELRI DLDPQPGTDF ADAVAVAAVL REVLDEAGLV GWPKTSGGRG 

       190        200        210        220        230        240 
IHVFARIRPE WSFIEVRRAV IAIARRVCAR IPEQATVDWW KEERGERVFL DYNQAARDRT 

       250        260        270        280        290        300 
IASAWSVRGL PRATVSMPLT WEALPSVEPE DFDLLTVPGL LARDGDPHAG MDDAVGGIET 

       310        320        330        340 
ALEWFAADER DRGLGELPYP PEYPKMPGEP MRVQPSRARA GKDAAG 

« Hide

References

[1]"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190."
Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L.
J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002593 Genomic DNA. Translation: AEA25101.1.
RefSeqYP_004332954.1. NC_015312.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA25101; AEA25101; Psed_2901.
GeneID10364737.
KEGGpdx:Psed_2901.
PATRIC54397312. VBIPseDio141225_2936.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAFHPWPVR.

Enzyme and pathway databases

BioCycPDIO675635:GHMF-2936-MONOMER.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF4CPI4_PSEUX
AccessionPrimary (citable) accession number: F4CPI4
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)