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F4CNP6 (F4CNP6_PSEUX) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F4CNP6 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 13C674D8BFD9E4FC

FASTA47849,723
        10         20         30         40         50         60 
MTVLEVDGLC ADAGEHRLLH DVDLVLDRGE VLAVLGDSGA GKSTLGLALL GESAPGVALS 

        70         80         90        100        110        120 
GTVRPVSGDG RHGDDRRSRP TGRVALLPQH PGAVLDPVRR VGGVLRELAA LGHDDRAARA 

       130        140        150        160        170        180 
EAVGAACEAA RFDPALLRRF PHQLSGGQQQ RAALAQTLVT GPAVLVLDEP TTSLDPATSA 

       190        200        210        220        230        240 
ELVDRLAALR DAGTALVLLT HDEEVARALG GRALRLDRGR VVARGTVAEL LGCAAPRHVP 

       250        260        270        280        290        300 
ASPVPGRARL EVRGLTVADR AGRLILRGID LDATAGEMVA VVGPSGAGKT TLGRGIAGLV 

       310        320        330        340        350        360 
DVRGTVRVDG ATLPARIGRR SRPQRRAVQY VHQDPRATFL ARSPVLDQVA RPATLLRDLP 

       370        380        390        400        410        420 
AAAAREEAGK LLARLGVAPD VAARRPATLS GGQLQRAAVA RALVARPAVL VCDEVTAALD 

       430        440        450        460        470 
AAHRDHLLAA IAALRHDHGT TVLLISHDLP LIERVADRTV LVADGCLRAE DPVRRASS 

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References

[1]"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190."
Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L.
J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002593 Genomic DNA. Translation: AEA22359.1.
RefSeqYP_004330212.1. NC_015312.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA22359; AEA22359; Psed_0082.
GeneID10361885.
KEGGpdx:Psed_0082.
PATRIC54391525. VBIPseDio141225_0081.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02031.
K02032.
OMARILHEID.

Enzyme and pathway databases

BioCycPDIO675635:GHMF-84-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMSSF52540. SSF52540. 2 hits.
PROSITEPS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4CNP6_PSEUX
AccessionPrimary (citable) accession number: F4CNP6
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)