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F4CNA3 (F4CNA3_PSEUX) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length683 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F4CNA3 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: F7F7D349CACEF0AF

FASTA68375,190
        10         20         30         40         50         60 
MPARRPDAAL RPMLATPGRP PSGPGWAVEF KWDGVRALLD VDDAGEVHLT SRNGNDVTLG 

        70         80         90        100        110        120 
YPDLLAGVDT GQPLVLDGEI VALDEAGRPD FGLLQNRMHV RHPSGPLLAE VPVRFYAFDV 

       130        140        150        160        170        180 
LRVGQRSLLR ETYDDRRAAL AGLGVDGWAR FAVPPSTTEV PPAQMLDVAR EHGLEGIVAK 

       190        200        210        220        230        240 
RRTSRYEPGR RAASWVKTAL FTTREVVLGG WTPGQGRRGA LGSLLLGAYD DEGRLHYLGN 

       250        260        270        280        290        300 
VGSGFSEAAL RSLREKLEQL RSDEDPFASG VPREHARGVR WVQPRLVGEV EYRTLTHDAR 

       310        320        330        340        350        360 
LRHSVWRGLR PDRDPHEVRI DGAFARAPLA SYGVRAPAPE PARAPAASEP AEAASARAEA 

       370        380        390        400        410        420 
PAERVRAATG DELAALDALR RKGTWHVAGE EVALTNLDKV LFPGRDGGPP VTKRDFVRYH 

       430        440        450        460        470        480 
ARVAPYLLPY LQGRPVNMQR FPDGVAREGF WQKEIPVHAP DWVTRWRYPD AEPGDVQDYV 

       490        500        510        520        530        540 
VVDSTATLVW LANLAAVELH PWTSRLPDVH RPTWALIDID PGPRTAFDEV LAVARLYRAA 

       550        560        570        580        590        600 
LDHLGVAAAP KVTGKRGVQI WVPVTPGPTF ADTRGWVEKV SRAVGRMVPE LISWEWHTDR 

       610        620        630        640        650        660 
RAGRMRLDYT QNVINKTLVA PFSARPAAGA PVSMTLSWDE LDDPELRPDR WTVGTALDRL 

       670        680 
DAVGDPMFPL VGREQVLPEL GGV 

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References

[1]"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190."
Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L.
J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002593 Genomic DNA. Translation: AEA27127.1.
RefSeqYP_004334980.1. NC_015312.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA27127; AEA27127; Psed_4989.
GeneID10366837.
KEGGpdx:Psed_4989.
PATRIC54401591. VBIPseDio141225_5059.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAVANTREA.

Enzyme and pathway databases

BioCycPDIO675635:GHMF-5036-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4CNA3_PSEUX
AccessionPrimary (citable) accession number: F4CNA3
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)