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F4CM31

- F4CM31_PSEUX

UniProt

F4CM31 - F4CM31_PSEUX

Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Psed_0243

Organism
Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. metal ion binding Source: InterPro
    3. phosphoric diester hydrolase activity Source: InterPro
    4. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciPDIO675635:GHMF-249-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator, LuxR familyImported
    Gene namesi
    Ordered Locus Names:Psed_0243Imported
    OrganismiPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)Imported
    Taxonomic identifieri675635 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaePseudonocardia
    ProteomesiUP000007809: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF4CM31.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

    Phylogenomic databases

    OMAiTRCQRGA.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProiIPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00196. GerE. 1 hit.
    [Graphical view]
    PRINTSiPR00038. HTHLUXR.
    SMARTiSM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view]
    SUPFAMiSSF46894. SSF46894. 1 hit.
    PROSITEiPS00622. HTH_LUXR_1. 1 hit.
    PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F4CM31-1 [UniParc]FASTAAdd to Basket

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    MTTGGLPSGV RKAELVAALS LATDLGLGLP EEHVLRQTVI ARRLARLAVL    50
    SAAQQDAVFY TSLLAWVGCV ADSHEMAHWF GDDRRLRAES YAVDKAGLPM 100
    LRFLVEQVGR DAGPARRLTA IGRFLVAGGV GEAMGSMITH CRTTADIAER 150
    LGLPDDIGRA LGQAFERWDG RGVPGRLRAA AIDPVIRVVH VADDTEQHHR 200
    AGGVGAATAM LRSRRGTEFD PDLVDLVCAH ADEVFDGLDA VSAWQSVLDD 250
    GSPAESPALT EDELTDALRV FGDYADLKAP CFLGHSAAVA ALAADAAGRM 300
    GLPDADVTLV ERAALVHDLG VHGVSSGVWD KPGPLSAGEW ERVRMHPYLT 350
    ERTLARVPQL AELGTLAALH HERLDGSGYP RGLRADAMPI TARVLAAAVR 400
    YRTAVEPRPH RPAAEPAAAQ TLLRADAAAG RLDGEAVNAV LAAAGHRVRR 450
    RPALPAGLSP REAQVLGLVA RGLSNRAIAA ELSLAPRTVG SHVEHVYTKI 500
    GVSTRGAAAM FAMRHGLVGD PVQG 524
    Length:524
    Mass (Da):55,319
    Last modified:June 28, 2011 - v1
    Checksum:i7F6D8DED6F6FF3D2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002593 Genomic DNA. Translation: AEA22518.1.
    RefSeqiWP_013672459.1. NC_015312.1.
    YP_004330371.1. NC_015312.1.

    Genome annotation databases

    EnsemblBacteriaiAEA22518; AEA22518; Psed_0243.
    GeneIDi10362050.
    KEGGipdx:Psed_0243.
    PATRICi54391859. VBIPseDio141225_0244.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002593 Genomic DNA. Translation: AEA22518.1 .
    RefSeqi WP_013672459.1. NC_015312.1.
    YP_004330371.1. NC_015312.1.

    3D structure databases

    ProteinModelPortali F4CM31.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA22518 ; AEA22518 ; Psed_0243 .
    GeneIDi 10362050.
    KEGGi pdx:Psed_0243.
    PATRICi 54391859. VBIPseDio141225_0244.

    Phylogenomic databases

    OMAi TRCQRGA.

    Enzyme and pathway databases

    BioCyci PDIO675635:GHMF-249-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProi IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00196. GerE. 1 hit.
    [Graphical view ]
    PRINTSi PR00038. HTHLUXR.
    SMARTi SM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46894. SSF46894. 1 hit.
    PROSITEi PS00622. HTH_LUXR_1. 1 hit.
    PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190Imported.

    Entry informationi

    Entry nameiF4CM31_PSEUX
    AccessioniPrimary (citable) accession number: F4CM31
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3