F4CM31 (F4CM31_PSEUX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LuxR family EMBL AEA22518.1

Gene names

Ordered Locus Names:

Psed_0243 EMBL AEA22518.1

Organism

Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) [Complete proteome] [HAMAP]

Taxonomic identifier

675635 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Pseudonocardia › Pseudonocardia dioxanivorans

Protein attributes

Sequence length	524 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707
Ligand	DNA-binding SAAS SAAS016032 RuleBase RU000707
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F4CM31 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: 7F6D8DED6F6FF3D2	FASTA	524	55,319
	10 20 30 40 50 60 MTTGGLPSGV RKAELVAALS LATDLGLGLP EEHVLRQTVI ARRLARLAVL SAAQQDAVFY 70 80 90 100 110 120 TSLLAWVGCV ADSHEMAHWF GDDRRLRAES YAVDKAGLPM LRFLVEQVGR DAGPARRLTA 130 140 150 160 170 180 IGRFLVAGGV GEAMGSMITH CRTTADIAER LGLPDDIGRA LGQAFERWDG RGVPGRLRAA 190 200 210 220 230 240 AIDPVIRVVH VADDTEQHHR AGGVGAATAM LRSRRGTEFD PDLVDLVCAH ADEVFDGLDA 250 260 270 280 290 300 VSAWQSVLDD GSPAESPALT EDELTDALRV FGDYADLKAP CFLGHSAAVA ALAADAAGRM 310 320 330 340 350 360 GLPDADVTLV ERAALVHDLG VHGVSSGVWD KPGPLSAGEW ERVRMHPYLT ERTLARVPQL 370 380 390 400 410 420 AELGTLAALH HERLDGSGYP RGLRADAMPI TARVLAAAVR YRTAVEPRPH RPAAEPAAAQ 430 440 450 460 470 480 TLLRADAAAG RLDGEAVNAV LAAAGHRVRR RPALPAGLSP REAQVLGLVA RGLSNRAIAA 490 500 510 520 ELSLAPRTVG SHVEHVYTKI GVSTRGAAAM FAMRHGLVGD PVQG

References

[1]

"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190." Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L. J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002593 Genomic DNA. Translation: AEA22518.1.
RefSeq	YP_004330371.1. NC_015312.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA22518; AEA22518; Psed_0243.
GeneID	10362050.
KEGG	pdx:Psed_0243.
PATRIC	54391859. VBIPseDio141225_0244.
Organism-specific databases
CMR	Search...
Enzyme and pathway databases
BioCyc	PDIO675635:GHMF-564-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit. 1.10.3210.10. 1 hit.
InterPro	IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00196. GerE. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00471. HDc. 1 hit. SM00421. HTH_LUXR. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit.
PROSITE	PS00622. HTH_LUXR_1. 1 hit. PS50043. HTH_LUXR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F4CM31_PSEUX

Accession

Primary (citable) accession number: F4CM31

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)