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F4CM31 (F4CM31_PSEUX) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length524 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
F4CM31 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 7F6D8DED6F6FF3D2

FASTA52455,319
        10         20         30         40         50         60 
MTTGGLPSGV RKAELVAALS LATDLGLGLP EEHVLRQTVI ARRLARLAVL SAAQQDAVFY 

        70         80         90        100        110        120 
TSLLAWVGCV ADSHEMAHWF GDDRRLRAES YAVDKAGLPM LRFLVEQVGR DAGPARRLTA 

       130        140        150        160        170        180 
IGRFLVAGGV GEAMGSMITH CRTTADIAER LGLPDDIGRA LGQAFERWDG RGVPGRLRAA 

       190        200        210        220        230        240 
AIDPVIRVVH VADDTEQHHR AGGVGAATAM LRSRRGTEFD PDLVDLVCAH ADEVFDGLDA 

       250        260        270        280        290        300 
VSAWQSVLDD GSPAESPALT EDELTDALRV FGDYADLKAP CFLGHSAAVA ALAADAAGRM 

       310        320        330        340        350        360 
GLPDADVTLV ERAALVHDLG VHGVSSGVWD KPGPLSAGEW ERVRMHPYLT ERTLARVPQL 

       370        380        390        400        410        420 
AELGTLAALH HERLDGSGYP RGLRADAMPI TARVLAAAVR YRTAVEPRPH RPAAEPAAAQ 

       430        440        450        460        470        480 
TLLRADAAAG RLDGEAVNAV LAAAGHRVRR RPALPAGLSP REAQVLGLVA RGLSNRAIAA 

       490        500        510        520 
ELSLAPRTVG SHVEHVYTKI GVSTRGAAAM FAMRHGLVGD PVQG 

« Hide

References

[1]"Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190."
Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T., Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A., Alvarez-Cohen L.
J. Bacteriol. 193:4549-4550(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002593 Genomic DNA. Translation: AEA22518.1.
RefSeqYP_004330371.1. NC_015312.1.

3D structure databases

ProteinModelPortalF4CM31.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA22518; AEA22518; Psed_0243.
GeneID10362050.
KEGGpdx:Psed_0243.
PATRIC54391859. VBIPseDio141225_0244.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMATRCQRGA.

Enzyme and pathway databases

BioCycPDIO675635:GHMF-249-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4CM31_PSEUX
AccessionPrimary (citable) accession number: F4CM31
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: February 19, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)