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F4CM31

- F4CM31_PSEUX

UniProt

F4CM31 - F4CM31_PSEUX

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Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Psed_0243

Organism
Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciPDIO675635:GHMF-249-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Psed_0243Imported
OrganismiPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)Imported
Taxonomic identifieri675635 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaePseudonocardia
ProteomesiUP000007809: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4CM31.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

OMAiTRCQRGA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4CM31 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTGGLPSGV RKAELVAALS LATDLGLGLP EEHVLRQTVI ARRLARLAVL
60 70 80 90 100
SAAQQDAVFY TSLLAWVGCV ADSHEMAHWF GDDRRLRAES YAVDKAGLPM
110 120 130 140 150
LRFLVEQVGR DAGPARRLTA IGRFLVAGGV GEAMGSMITH CRTTADIAER
160 170 180 190 200
LGLPDDIGRA LGQAFERWDG RGVPGRLRAA AIDPVIRVVH VADDTEQHHR
210 220 230 240 250
AGGVGAATAM LRSRRGTEFD PDLVDLVCAH ADEVFDGLDA VSAWQSVLDD
260 270 280 290 300
GSPAESPALT EDELTDALRV FGDYADLKAP CFLGHSAAVA ALAADAAGRM
310 320 330 340 350
GLPDADVTLV ERAALVHDLG VHGVSSGVWD KPGPLSAGEW ERVRMHPYLT
360 370 380 390 400
ERTLARVPQL AELGTLAALH HERLDGSGYP RGLRADAMPI TARVLAAAVR
410 420 430 440 450
YRTAVEPRPH RPAAEPAAAQ TLLRADAAAG RLDGEAVNAV LAAAGHRVRR
460 470 480 490 500
RPALPAGLSP REAQVLGLVA RGLSNRAIAA ELSLAPRTVG SHVEHVYTKI
510 520
GVSTRGAAAM FAMRHGLVGD PVQG
Length:524
Mass (Da):55,319
Last modified:June 28, 2011 - v1
Checksum:i7F6D8DED6F6FF3D2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002593 Genomic DNA. Translation: AEA22518.1.
RefSeqiYP_004330371.1. NC_015312.1.

Genome annotation databases

EnsemblBacteriaiAEA22518; AEA22518; Psed_0243.
GeneIDi10362050.
KEGGipdx:Psed_0243.
PATRICi54391859. VBIPseDio141225_0244.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002593 Genomic DNA. Translation: AEA22518.1 .
RefSeqi YP_004330371.1. NC_015312.1.

3D structure databases

ProteinModelPortali F4CM31.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEA22518 ; AEA22518 ; Psed_0243 .
GeneIDi 10362050.
KEGGi pdx:Psed_0243.
PATRICi 54391859. VBIPseDio141225_0244.

Phylogenomic databases

OMAi TRCQRGA.

Enzyme and pathway databases

BioCyci PDIO675635:GHMF-249-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProi IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00196. GerE. 1 hit.
[Graphical view ]
PRINTSi PR00038. HTHLUXR.
SMARTi SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view ]
SUPFAMi SSF46894. SSF46894. 1 hit.
PROSITEi PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 55486 / DSM 44775 / JCM 13855 / CB1190Imported.

Entry informationi

Entry nameiF4CM31_PSEUX
AccessioniPrimary (citable) accession number: F4CM31
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 29, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3