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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Sph21_2161

Organism
Sphingobacterium sp. (strain 21)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciSSP743722:GH04-2183-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Sph21_2161Imported
OrganismiSphingobacterium sp. (strain 21)Imported
Taxonomic identifieri743722 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaeSphingobacterium
ProteomesiUP000007808 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF4CCC3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.
OMAiMSIFKGV.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F4CCC3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERIIAKYYI ETPFDPEKAA LTLAGEQSSG TFVSVPGETE DLKRRFAARV
60 70 80 90 100
ESVHLLGSVS QPAIPSPKFT SERYQRAYIE ISWSIENFGY NLPVLISTLQ
110 120 130 140 150
GNLYELSQFT GLKLLDIQFP ASYIAHFEGP RFGVAGSRAS TKVDGRPLIG
160 170 180 190 200
TIIKPSIGMS PSDSARLVKT LVEAGIDFIK DDELQSAAAN SKLEDRVDAI
210 220 230 240 250
MRVINAHADK TGKKVMYAFN ISDELDSMLS RYDYIVKAGG TCAMLSINSV
260 270 280 290 300
GLAGVKKICD QGALVIHGHR NGWGMLNRHP LLGIEFTAYQ KLWRLAGVDQ
310 320 330 340 350
LHVNGIQNKF WESDDSVVQS IEACLTPLFS RETLLPVVSS GQWGGQAFET
360 370 380 390 400
YRRTKTIDLL YMAGGGIMAH PKGPGGGVVA LQQAWEGAVK GLVMEEAVRL
410
YPEFAQSVQK FGQQ
Length:414
Mass (Da):45,385
Last modified:June 27, 2011 - v1
Checksum:i15C9D63E71206BD1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002584 Genomic DNA. Translation: ADZ78716.1.
RefSeqiWP_013665438.1. NC_015277.1.
YP_004317386.1. NC_015277.1.

Genome annotation databases

EnsemblBacteriaiADZ78716; ADZ78716; Sph21_2161.
KEGGishg:Sph21_2161.
PATRICi47238256. VBISphSp165585_2308.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002584 Genomic DNA. Translation: ADZ78716.1.
RefSeqiWP_013665438.1. NC_015277.1.
YP_004317386.1. NC_015277.1.

3D structure databases

ProteinModelPortaliF4CCC3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ78716; ADZ78716; Sph21_2161.
KEGGishg:Sph21_2161.
PATRICi47238256. VBISphSp165585_2308.

Phylogenomic databases

KOiK01601.
OMAiMSIFKGV.

Enzyme and pathway databases

BioCyciSSP743722:GH04-2183-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Sphingobacterium sp. 21."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Siebers A.K., Allgaier M.
    , Thelen M.P., Hugenholtz P., Woyke T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 21Imported.

Entry informationi

Entry nameiF4CCC3_SPHS2
AccessioniPrimary (citable) accession number: F4CCC3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2011
Last sequence update: June 27, 2011
Last modified: March 31, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.