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F4CCC3 (F4CCC3_SPHS2) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ADZ78716.1
Gene names
Ordered Locus Names:Sph21_2161 EMBL ADZ78716.1
OrganismSphingobacterium sp. (strain 21) [Complete proteome] [HAMAP] EMBL ADZ78716.1
Taxonomic identifier743722 [NCBI]
Taxonomic lineageBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaeSphingobacterium

Protein attributes

Sequence length414 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ADZ78716.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F4CCC3 [UniParc].

Last modified June 28, 2011. Version 1.
Checksum: 15C9D63E71206BD1

FASTA41445,385
        10         20         30         40         50         60 
MERIIAKYYI ETPFDPEKAA LTLAGEQSSG TFVSVPGETE DLKRRFAARV ESVHLLGSVS 

        70         80         90        100        110        120 
QPAIPSPKFT SERYQRAYIE ISWSIENFGY NLPVLISTLQ GNLYELSQFT GLKLLDIQFP 

       130        140        150        160        170        180 
ASYIAHFEGP RFGVAGSRAS TKVDGRPLIG TIIKPSIGMS PSDSARLVKT LVEAGIDFIK 

       190        200        210        220        230        240 
DDELQSAAAN SKLEDRVDAI MRVINAHADK TGKKVMYAFN ISDELDSMLS RYDYIVKAGG 

       250        260        270        280        290        300 
TCAMLSINSV GLAGVKKICD QGALVIHGHR NGWGMLNRHP LLGIEFTAYQ KLWRLAGVDQ 

       310        320        330        340        350        360 
LHVNGIQNKF WESDDSVVQS IEACLTPLFS RETLLPVVSS GQWGGQAFET YRRTKTIDLL 

       370        380        390        400        410 
YMAGGGIMAH PKGPGGGVVA LQQAWEGAVK GLVMEEAVRL YPEFAQSVQK FGQQ 

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References

[1]"Complete sequence of Sphingobacterium sp. 21."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Siebers A.K., Allgaier M. expand/collapse author list , Thelen M.P., Hugenholtz P., Woyke T.
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 21.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002584 Genomic DNA. Translation: ADZ78716.1.
RefSeqYP_004317386.1. NC_015277.1.

3D structure databases

ProteinModelPortalF4CCC3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ78716; ADZ78716; Sph21_2161.
GeneID10347910.
KEGGshg:Sph21_2161.
PATRIC47238256. VBISphSp165585_2308.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.
OMALAHFCSE.

Enzyme and pathway databases

BioCycSSP743722:GH04-2183-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF4CCC3_SPHS2
AccessionPrimary (citable) accession number: F4CCC3
Entry history
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: January 22, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)